Gene NSE_0267 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNSE_0267 
SymbolrplD 
ID3931993 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNeorickettsia sennetsu str. Miyayama 
KingdomBacteria 
Replicon accessionNC_007798 
Strand
Start bp225085 
End bp225729 
Gene Length645 bp 
Protein Length214 aa 
Translation table11 
GC content45% 
IMG OID637900423 
Productribosomal protein L4 
Protein accessionYP_506158 
Protein GI88608608 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0088] Ribosomal protein L4 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value3.35514e-11 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTAGTC TAGAGGTAGG AGTTTTGGAT TTTGGTGCCA GCAGTCTTGC TGGAAGTGTC 
GCGGTGGATC GTGCGCTTAT AGAAGCGCCG TTTCGTCCTG ATCTGCTGAG CCTTGTGATA
AATTGGCAGC TTGCAAAAAG ACGTGCTGGT ACTCACAAAA CAAAGGGTAT CTCTGAGGTT
AGTGGTACGA CTAGAAAGCC GTACAGACAG AAGGGTACTG GTAGAGCAAG GCAGGGTAGT
TTGCGTGCTC CCCAATTTCG CAAGGGTGGA ATTGTGTTTG GACCGGTGGT TAGGCAGCAT
GGTTTTTCTG TCAATAAGAA GGTCAGGTCT CTTGCTCTTC GTTCAGCTCT ATCGATGAGA
TTTGCTGAGG GTCGCCTGTT TGTTCTTGAA AGTTCTAGGT TGGGTGAGTC AAAAGCTGCT
ACGTTGTTGA AATGGTTTGC TTCGAATGCT GAGTTATCTG TAGGTAAGAA GTTTCTCATT
GTGACAGAAG AAAAAAACGA AGGTTTGCTC AGGGCAGCTT CCAATTTGCA TTGGGTTAAG
GTTTTATGGG GATCTTCTGC TAATGTATAC GATGTTGTCC TGCATGACTT TGTGTTGCTT
GAGAAAGCAT CTGTTGATGT ATTGGTTAAG AGGTTGCTGA AATGA
 
Protein sequence
MSSLEVGVLD FGASSLAGSV AVDRALIEAP FRPDLLSLVI NWQLAKRRAG THKTKGISEV 
SGTTRKPYRQ KGTGRARQGS LRAPQFRKGG IVFGPVVRQH GFSVNKKVRS LALRSALSMR
FAEGRLFVLE SSRLGESKAA TLLKWFASNA ELSVGKKFLI VTEEKNEGLL RAASNLHWVK
VLWGSSANVY DVVLHDFVLL EKASVDVLVK RLLK