Gene NSE_0266 details

Gene Information

• Locus tag: NSE_0266
• Symbol: rplC
• ID: 3931338
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Neorickettsia sennetsu str. Miyayama
• Kingdom: Bacteria
• Replicon accession: NC_007798
• Strand: +
• Start bp: 224453
• End bp: 225085
• Gene Length: 633 bp
• Protein Length: 210 aa
• Translation table: 11
• GC content: 46%
• IMG OID: 637900422
• Product: ribosomal protein L3
• Protein accession: YP_506157
• Protein GI: 88608492
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0087] Ribosomal protein L3
• TIGRFAM ID: [TIGR03625] 50S ribosomal protein L3, bacterial

Plasmid Coverage information

• Num covering plasmid clones: 0
• Plasmid unclonability p-value: 0.0000000000356629
• Plasmid hitchhiking: No
• Plasmid clonability: unclonable

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGTAGGG TTGGTTTGTT GCTTAAGAAG GTTGGCTGTA CCTCGGTCTA CGACGATCGT 
TTTTCTTTAG TGCCGATTAC GCTTCTTCAG TTAGAAGAAA ATGTTGTCCT TTCCGCTGAG 
GAGAGGGACG GTGTTGTTAT CGCGAGGGTC TCATTTGGAA CGAGGAAGCT CAAGAGGCCA 
CAGTCGGCGT GCTTGAAGAA ACTTGGTCTA GAGAAAGGTG GTAGAGTTGT TGAATTTCGG 
GTTTCACCTC GTTTTATGCC AGAACCGCTC GGGTCTCTTA CAGTAGAGCA TTTTCGTCCT 
GGTCAGTACG TCGATGCTGT TGGGACAAGT ATAGGAAAGG GTTTTGCTGG TGTAATGAAG 
AGGCATAATT TTGCTGGTTT GCGCGCTTCC CACGGTGTTT CTATATCACA TAGATCAGGT 
GGATCTACAG GGCAGTGTCA GGATCCTGGA AAAGTTTTTA AGGGAAAAAA AATGGCGGGG 
CACATGGGTA ATGCTAGAGT TACCATACAG AATCTATTGG TTCAGTTAGT GGACGTTGAA 
AACTGTCTCA TAGGTGTACG CGGAAGCGTC CCTGGATGCA AGAATTCCTA CGTTTTGCTG 
AAGGATGCGT TAAAAAAAGG TGAGTTTGTG TGA 

 

Protein sequence

MSRVGLLLKK VGCTSVYDDR FSLVPITLLQ LEENVVLSAE ERDGVVIARV SFGTRKLKRP 
QSACLKKLGL EKGGRVVEFR VSPRFMPEPL GSLTVEHFRP GQYVDAVGTS IGKGFAGVMK 
RHNFAGLRAS HGVSISHRSG GSTGQCQDPG KVFKGKKMAG HMGNARVTIQ NLLVQLVDVE 
NCLIGVRGSV PGCKNSYVLL KDALKKGEFV