Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | NSE_0217 |
Symbol | rpiB |
ID | 3932019 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Neorickettsia sennetsu str. Miyayama |
Kingdom | Bacteria |
Replicon accession | NC_007798 |
Strand | + |
Start bp | 183158 |
End bp | 183616 |
Gene Length | 459 bp |
Protein Length | 152 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 637900373 |
Product | ribose 5-phosphate isomerase B |
Protein accession | YP_506112 |
Protein GI | 88608285 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0698] Ribose 5-phosphate isomerase RpiB |
TIGRFAM ID | [TIGR00689] sugar-phosphate isomerases, RpiB/LacA/LacB family [TIGR01120] ribose 5-phosphate isomerase B |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.00182493 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGAACGTGA GGGTTTCCAT AGGTGCTGAT CATGCGGGGT TTGCACTCAA AGCAGTTTTG ATAGACTTCT TTAGGGCACG GGGATGCTTG CCCGTGGATA GGGGTGCGTA TTGCTTAGAT GTTTCTGATT ATCCTGATTT TGCTAAATCT GTTTCCTTAG ACGTATCGGA TGGGAGGGTG GATTTTGGCA TCTTAATATG TGGTTCTGGT ATCGGGATGA GTATAACCGC CAACAGGTAT AAAAAGGTCC GGGCTGCTCT GTGTTATGAT GTGCGAGCAG CAAAGATGGC TAGGGAACAT AATGATGCAA ATGTCTTATG TCTTGCAGGA AGAGATCTGA CTGTATCAAG GTGTCTTGAA ATAGTTGAGG CATTTGTAAG TAGTAAGTTT AGTTGTGAGG AGCGTCACAA GAAAAGGATA GAAAAAATTG ATGAGGGGGG GGGGAATAGT GTTTTTTAA
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Protein sequence | MNVRVSIGAD HAGFALKAVL IDFFRARGCL PVDRGAYCLD VSDYPDFAKS VSLDVSDGRV DFGILICGSG IGMSITANRY KKVRAALCYD VRAAKMAREH NDANVLCLAG RDLTVSRCLE IVEAFVSSKF SCEERHKKRI EKIDEGGGNS VF
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