| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | NSE_0163 |
|---|
| Symbol | thyX |
|---|
| ID | 3931400 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Neorickettsia sennetsu str. Miyayama |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007798 |
|---|
| Strand | + |
|---|
| Start bp | 130622 |
|---|
| End bp | 131500 |
|---|
| Gene Length | 879 bp |
|---|
| Protein Length | 292 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 637900319 |
|---|
| Product | FAD-dependent thymidylate synthase |
|---|
| Protein accession | YP_506060 |
|---|
| Protein GI | 88608520 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG1351] Predicted alternative thymidylate synthase |
|---|
| TIGRFAM ID | [TIGR02170] thymidylate synthase, flavin-dependent |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.0000550226 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGGTGGATA AGGAGAATCT CAACAAAACT AAGAGAGTTG TCTCTGAGAG TCTAGAGGAG
AAGCTTGGCG AGTCTTACCA AGTTTTTAAT AGTGGGTTCG TGCGCGTTGT TGACTACATG
GGAAACGATC AGGCGATTGT TCAGGCCGCT CGGGTTTCCT ATGGAAAGGG AACAAAAACA
GTGAACCAAG ATCGTGGTTT GATACATTAC TTGATGCGAC ATGGGCACAC TACACCATTC
GAAATGTGTG AAATAAAGTT TCATGTCAAG ATGCCTATAT TTGTTGCCAG ACAATGGATT
AGGCACAGGA CAGCTAATGT TAACGAATAC TCAGCGCGCT ACTCAATTGT CAAGGAGGAG
TTTTATATTC CTGAGATTGA CAAAGTTTGT TATCAATCTG CTACCAATTC TCAGGGAAGA
GGAGATAGGC TCGAGCAGGA ATTTGCACAA GAATTTCGTC ATTTTCTCAT AGAAAGTAAT
AGTGCAACAT ACGATGAGTA CACGCGCTTC ATAGAGACAG GATTAGCTCG TGAGATCGCG
CGTATTGCGA TGCCCTTAAA TACCTACACA GAAATGTATT GGAAAGTGGA TTTGCATAAT
CTGTTTCACT TTTTGAAATT ACGTTCACAT CAAGGGGCAC AGTACGAGAT TCGCAAGTAT
GCTGAGGTCA TTGAGGAAAT TGTGGGTTCC TGGGTTCCGA TGGCCTATGA AGCTTTTTTA
GAATATGTAA AACACGCAAA GACCCTCTCT AGGAGTGCAA TTAAATACGT TCGCGATAAT
CTCAAAGGAG AACTTTCTTC CGAAAGGGAA AAATATGGTA TTGGTATGCG TGAATTTACT
GAAGTAACCG AGATACTTAG TGGAACGGAA GAGGGATAG
|
|---|
| Protein sequence | MVDKENLNKT KRVVSESLEE KLGESYQVFN SGFVRVVDYM GNDQAIVQAA RVSYGKGTKT
VNQDRGLIHY LMRHGHTTPF EMCEIKFHVK MPIFVARQWI RHRTANVNEY SARYSIVKEE
FYIPEIDKVC YQSATNSQGR GDRLEQEFAQ EFRHFLIESN SATYDEYTRF IETGLAREIA
RIAMPLNTYT EMYWKVDLHN LFHFLKLRSH QGAQYEIRKY AEVIEEIVGS WVPMAYEAFL
EYVKHAKTLS RSAIKYVRDN LKGELSSERE KYGIGMREFT EVTEILSGTE EG
|
|---|
| |