Gene NSE_0125 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNSE_0125 
Symbol 
ID3931836 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNeorickettsia sennetsu str. Miyayama 
KingdomBacteria 
Replicon accessionNC_007798 
Strand
Start bp102414 
End bp103640 
Gene Length1227 bp 
Protein Length408 aa 
Translation table11 
GC content41% 
IMG OID637900281 
ProductRmuC domain-containing protein 
Protein accessionYP_506025 
Protein GI88608334 
COG category[S] Function unknown 
COG ID[COG1322] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.63126 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTACTGT TTCTTGGAGT AAGCAACTTT TTATTAGTAT TGGTCTCCTT GTACCTAGTT 
TATGTGAAGG TGCGCACAAG TACCATTTTA GAGAATGAAC AGGAGAAGCT AGGTAAAGCT
CTCAGAGAAT TGTCTGAATC TGAGTCTGCT TGTAGAAAGC GAGAAGAAGA AAATACTGAC
CTTATTAGAC GGGTTGTCCA ACTTGAGTCG GAAAAAAAAA GTTTTGAATA CTCACAAAAG
GCCATGTATG CCGAGTTTGA AACTCTGGCT AGCAAGATCC TCGAAAGTAG TGCGGTTCGA
CTTAAGGAGC AGTCTATTAA TGATATAGGT GGTCTTCTAG AACCACTTAA ACTCAAGATA
ACTGAATTTG AAAAGCGAAT AGAAGAATCA TTTCATGCTG ATATCAAAGA GAGGTATTCT
CTGGCAAAAG AAATTGCACG CATGGCCTCG CAGACCGATA AAATGATTGA AGAGGCAAAC
AAGTTGGGGA GGAGTTTGCG AGGTGATAGC AAGACCCAAG GTTCGTGGGG GGAACTTGTT
TTAAGCAAGA TACTTGAGTG TTCGGGTCTG CAAAAAGGAC GAGACTATAT GCTTCAGCAG
AAACTTAAAA ACGATACTAT TCCGGACGTG ATAATCAATC TTCCTGATGG TAAACACCTC
GTAGTTGATG CAAAAACCCC ACTTAAGCAT TATGACCTGT ACATCAACAC TCATGAAAAA
GAGCACCTAG AGAATTTCTT AAAATCTGTA AGAAGCCACG TAAAAAATCT TTCAGGAAAA
GAATATCACT CCGCTCAGGA ACTTTTTACT CCAGGCTTTG TATTCATGTT TGTCCCGGTC
GAGAGCGCTT ACGCGCTTGC TCTTTCAACT GATCTTGAAC TAAAAGAATT AGCTCTACGA
AGTAGGGTAA TGATTGTCTC ACCGAACTCA CTTGTAGCGA TGCTACAAGC TGTGTCTTCC
GTGTGGAGGA TAGTTGATCA AAATAAAAAC GCGAATGAAA TAGCTAAAAA GGCAGGTGCT
ATGTACGATA AATTCGTTTT ATTCGTGGAT GAGTTAGCGA AGATTGGGCA TTCTATTGCC
AATTCTGACA GACTTTACAG AAGTGCTATG AACAAGCTTA GAGACGGAAG GGGTAGCCTG
CTCGGTAGGG CGGAGGATTT AAAAGGTATG GGAATTCAGG CTAATAAAGA AATTAATGAA
GACCGTCTAT ATCTCAAGTC GGAGTGA
 
Protein sequence
MLLFLGVSNF LLVLVSLYLV YVKVRTSTIL ENEQEKLGKA LRELSESESA CRKREEENTD 
LIRRVVQLES EKKSFEYSQK AMYAEFETLA SKILESSAVR LKEQSINDIG GLLEPLKLKI
TEFEKRIEES FHADIKERYS LAKEIARMAS QTDKMIEEAN KLGRSLRGDS KTQGSWGELV
LSKILECSGL QKGRDYMLQQ KLKNDTIPDV IINLPDGKHL VVDAKTPLKH YDLYINTHEK
EHLENFLKSV RSHVKNLSGK EYHSAQELFT PGFVFMFVPV ESAYALALST DLELKELALR
SRVMIVSPNS LVAMLQAVSS VWRIVDQNKN ANEIAKKAGA MYDKFVLFVD ELAKIGHSIA
NSDRLYRSAM NKLRDGRGSL LGRAEDLKGM GIQANKEINE DRLYLKSE