Gene NSE_0085 details

Gene Information

• Locus tag: NSE_0085
• ID: 3931898
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Neorickettsia sennetsu str. Miyayama
• Kingdom: Bacteria
• Replicon accession: NC_007798
• Strand: +
• Start bp: 73527
• End bp: 73961
• Gene Length: 435 bp
• Protein Length: 144 aa
• Translation table: 11
• GC content: 42%
• IMG OID: 637900241
• Product: cytidine/deoxycytidylate deaminase family protein
• Protein accession: YP_505986
• Protein GI: 88608086
• COG category: [F] Nucleotide transport and metabolism; [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0590] Cytosine/adenosine deaminases

Plasmid Coverage information

• Num covering plasmid clones: 37
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGATAAGA AGTTCATGGA GCTAGCAATG AGTGTTGCTC GTCAGTCTGA TTGTGAAGTG 
CCTGTTGGGG CGGTCCTAGT TAGGCAGGGT GCTGTTATTG CCTCATCTGG TAATCGTGTT 
TTTCGAGATT CTGATCCTAC AGCGCATGCC GAAATGTTTG TTATAAGAGA AGCAATCCAA 
AGGCTGGGTG TAAAGTTTCT TGTGGATTTC GAACTGTATG TAACGTTGGA GCCATGTCCG 
ATGTGTATGT ATGCGATGTC TTTAAGCAGG GTCGGTACAC TTTGTTTTGC CGCGTATGAC 
GAAAAACGTG GTGCCATTTC AAATGGCTGT CTTGGTACGG GAACTTATTT TCATGTACCA 
ATAATATATG AAGGCCTTAT GGAGGATGAA GCTAAGGAGC TTTTATCCAG TTTTTTTCGT 
ATTTTAAGAA ATTAA 

 

Protein sequence

MDKKFMELAM SVARQSDCEV PVGAVLVRQG AVIASSGNRV FRDSDPTAHA EMFVIREAIQ 
RLGVKFLVDF ELYVTLEPCP MCMYAMSLSR VGTLCFAAYD EKRGAISNGC LGTGTYFHVP 
IIYEGLMEDE AKELLSSFFR ILRN