Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | NSE_0084 |
Symbol | gatB |
ID | 3932268 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Neorickettsia sennetsu str. Miyayama |
Kingdom | Bacteria |
Replicon accession | NC_007798 |
Strand | + |
Start bp | 72068 |
End bp | 73534 |
Gene Length | 1467 bp |
Protein Length | 488 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 637900240 |
Product | aspartyl/glutamyl-tRNA amidotransferase subunit B |
Protein accession | YP_505985 |
Protein GI | 88608306 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0064] Asp-tRNAAsn/Glu-tRNAGln amidotransferase B subunit (PET112 homolog) |
TIGRFAM ID | [TIGR00133] glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, B subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTATTATA TAGATGGAAA GACTGCTCGA TGGGAGGTTG TTATCGGACT GGAGGTACAT GCACAGATTC TCTCCAAAAA TAAATTATTC TCCGATGCTC CATGTGATTC TACTAAGGGG CCTAATACGG CAGTGACTCT TTTTGATGCT GCAATGCCAG GAGTCCTGCC AGTTTTGAAT TTTAACTGTG TTGAGAAAGC TATTAGAGCT GGTTTAGGTC TTGGAGGGAA GATTAATTTA TACTCGGTAT TCGAGAGGAA ACACTACTTT TATCCAGATC TCCCGCATGG TTACCAGATT ACCCAAAATA GCTATCCGAT CATAACTGGT GGGTGTGTGC GAATAAGAAA TCCTGATAAA GTCATTAGGA TAAATCGCAT ACACATCGAA CAGGATGCAG GCAAAAGCAT ACATAACCTC GCACCTGGCA AAACATATAT AGACCTTAAT AGGGCCGGAA TCCCATTGAT GGAGATAGTC TCAGAGCCCG ATATATCATC TCCTGCTGAG GCAGTCGCTT ATGTGGACAA GTTGAAGCTT ATTCTGCAGT ATGTTTGTGC TTCGAACGCT AACATGGAAA AAGGTGAGCT TCGCTGTGAT GCAAACGTTT CGGTTCGAAG GGGAGGTGAG TCGGGGCTGG GTACAAGATG TGAGATAAAA AATCTCAACT CGACTAAAAG CCTGGCTCAG GCGATAGAAC ATGAAGCTAA AAGACAAGTA GAAGTTCTTG AAAGTGGTGG CACGATTGTG GTCGAAACAA AACTTTTTGA TGTGGACACT CTAAGTACTA TTGCCACAAG ATCCAAGGAA TCTGCAACCG AATACCGTTA TTTTGCGGAT CCTGACTTGC TTCCTCTTGT TTTGGAGGAA AAGTATGTAG AGGATATTAA GGCTTCGATG CCTGAGTTAC CCGACGAGAG AGAAAATAGA TATGTGAGAG AGCTTAACTT ATCTCCATAT GATGCGAACG TGCTTGTTTC GAATGTTAAT GCCTCGCGAT ATTTTGATGC CCTTTTGGAA CTTGGTCATC AGCCAAAACT TGCTGCTAGA TGGATCACTG TTGAGCTCTT CGGTTTGCTT AACAAGCGTG GTATCAAAAT CGTGGAAAGT CCTGTGACTC CAGCTTTGAT GGATGAACTT CTGAGACTTG TGCATAGCGC GGAAATATCA GAGCGAACGG CAAAAGAAGT GCTACGAAAA AGCTTTGAAG GTATGGGTTC GCCGAAAGAA ATTGTGGAAC GCGAGAGCTT ACGACAAGTC ACGGACGATA AGGTTATTCT CGGGTATGTA AAAGAGGTAT TAGATGAAAA TCCTACGAAG CTTGGAGAGT ATTTCATGGG TAAAGAGAAA ATGCTTGCCT TTTTGGTTGG GCAAGTGATT AAGAAAAGCA ACGGGAATGC AAGTCCCCAT TTGGTAAACA AAGTTTTACT TGAGGAACTC GAAAGGCGTC GCGCACAGAA TGGATAA
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Protein sequence | MYYIDGKTAR WEVVIGLEVH AQILSKNKLF SDAPCDSTKG PNTAVTLFDA AMPGVLPVLN FNCVEKAIRA GLGLGGKINL YSVFERKHYF YPDLPHGYQI TQNSYPIITG GCVRIRNPDK VIRINRIHIE QDAGKSIHNL APGKTYIDLN RAGIPLMEIV SEPDISSPAE AVAYVDKLKL ILQYVCASNA NMEKGELRCD ANVSVRRGGE SGLGTRCEIK NLNSTKSLAQ AIEHEAKRQV EVLESGGTIV VETKLFDVDT LSTIATRSKE SATEYRYFAD PDLLPLVLEE KYVEDIKASM PELPDERENR YVRELNLSPY DANVLVSNVN ASRYFDALLE LGHQPKLAAR WITVELFGLL NKRGIKIVES PVTPALMDEL LRLVHSAEIS ERTAKEVLRK SFEGMGSPKE IVERESLRQV TDDKVILGYV KEVLDENPTK LGEYFMGKEK MLAFLVGQVI KKSNGNASPH LVNKVLLEEL ERRRAQNG
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