Gene NSE_0084 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNSE_0084 
SymbolgatB 
ID3932268 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNeorickettsia sennetsu str. Miyayama 
KingdomBacteria 
Replicon accessionNC_007798 
Strand
Start bp72068 
End bp73534 
Gene Length1467 bp 
Protein Length488 aa 
Translation table11 
GC content43% 
IMG OID637900240 
Productaspartyl/glutamyl-tRNA amidotransferase subunit B 
Protein accessionYP_505985 
Protein GI88608306 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0064] Asp-tRNAAsn/Glu-tRNAGln amidotransferase B subunit (PET112 homolog) 
TIGRFAM ID[TIGR00133] glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, B subunit 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTATTATA TAGATGGAAA GACTGCTCGA TGGGAGGTTG TTATCGGACT GGAGGTACAT 
GCACAGATTC TCTCCAAAAA TAAATTATTC TCCGATGCTC CATGTGATTC TACTAAGGGG
CCTAATACGG CAGTGACTCT TTTTGATGCT GCAATGCCAG GAGTCCTGCC AGTTTTGAAT
TTTAACTGTG TTGAGAAAGC TATTAGAGCT GGTTTAGGTC TTGGAGGGAA GATTAATTTA
TACTCGGTAT TCGAGAGGAA ACACTACTTT TATCCAGATC TCCCGCATGG TTACCAGATT
ACCCAAAATA GCTATCCGAT CATAACTGGT GGGTGTGTGC GAATAAGAAA TCCTGATAAA
GTCATTAGGA TAAATCGCAT ACACATCGAA CAGGATGCAG GCAAAAGCAT ACATAACCTC
GCACCTGGCA AAACATATAT AGACCTTAAT AGGGCCGGAA TCCCATTGAT GGAGATAGTC
TCAGAGCCCG ATATATCATC TCCTGCTGAG GCAGTCGCTT ATGTGGACAA GTTGAAGCTT
ATTCTGCAGT ATGTTTGTGC TTCGAACGCT AACATGGAAA AAGGTGAGCT TCGCTGTGAT
GCAAACGTTT CGGTTCGAAG GGGAGGTGAG TCGGGGCTGG GTACAAGATG TGAGATAAAA
AATCTCAACT CGACTAAAAG CCTGGCTCAG GCGATAGAAC ATGAAGCTAA AAGACAAGTA
GAAGTTCTTG AAAGTGGTGG CACGATTGTG GTCGAAACAA AACTTTTTGA TGTGGACACT
CTAAGTACTA TTGCCACAAG ATCCAAGGAA TCTGCAACCG AATACCGTTA TTTTGCGGAT
CCTGACTTGC TTCCTCTTGT TTTGGAGGAA AAGTATGTAG AGGATATTAA GGCTTCGATG
CCTGAGTTAC CCGACGAGAG AGAAAATAGA TATGTGAGAG AGCTTAACTT ATCTCCATAT
GATGCGAACG TGCTTGTTTC GAATGTTAAT GCCTCGCGAT ATTTTGATGC CCTTTTGGAA
CTTGGTCATC AGCCAAAACT TGCTGCTAGA TGGATCACTG TTGAGCTCTT CGGTTTGCTT
AACAAGCGTG GTATCAAAAT CGTGGAAAGT CCTGTGACTC CAGCTTTGAT GGATGAACTT
CTGAGACTTG TGCATAGCGC GGAAATATCA GAGCGAACGG CAAAAGAAGT GCTACGAAAA
AGCTTTGAAG GTATGGGTTC GCCGAAAGAA ATTGTGGAAC GCGAGAGCTT ACGACAAGTC
ACGGACGATA AGGTTATTCT CGGGTATGTA AAAGAGGTAT TAGATGAAAA TCCTACGAAG
CTTGGAGAGT ATTTCATGGG TAAAGAGAAA ATGCTTGCCT TTTTGGTTGG GCAAGTGATT
AAGAAAAGCA ACGGGAATGC AAGTCCCCAT TTGGTAAACA AAGTTTTACT TGAGGAACTC
GAAAGGCGTC GCGCACAGAA TGGATAA
 
Protein sequence
MYYIDGKTAR WEVVIGLEVH AQILSKNKLF SDAPCDSTKG PNTAVTLFDA AMPGVLPVLN 
FNCVEKAIRA GLGLGGKINL YSVFERKHYF YPDLPHGYQI TQNSYPIITG GCVRIRNPDK
VIRINRIHIE QDAGKSIHNL APGKTYIDLN RAGIPLMEIV SEPDISSPAE AVAYVDKLKL
ILQYVCASNA NMEKGELRCD ANVSVRRGGE SGLGTRCEIK NLNSTKSLAQ AIEHEAKRQV
EVLESGGTIV VETKLFDVDT LSTIATRSKE SATEYRYFAD PDLLPLVLEE KYVEDIKASM
PELPDERENR YVRELNLSPY DANVLVSNVN ASRYFDALLE LGHQPKLAAR WITVELFGLL
NKRGIKIVES PVTPALMDEL LRLVHSAEIS ERTAKEVLRK SFEGMGSPKE IVERESLRQV
TDDKVILGYV KEVLDENPTK LGEYFMGKEK MLAFLVGQVI KKSNGNASPH LVNKVLLEEL
ERRRAQNG