Gene NSE_0078 details

Gene Information

• Locus tag: NSE_0078
• ID: 3932242
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Neorickettsia sennetsu str. Miyayama
• Kingdom: Bacteria
• Replicon accession: NC_007798
• Strand: -
• Start bp: 67388
• End bp: 68098
• Gene Length: 711 bp
• Protein Length: 236 aa
• Translation table: 11
• GC content: 48%
• IMG OID: 637900234
• Product: hypothetical protein
• Protein accession: YP_505979
• Protein GI: 88608450

Plasmid Coverage information

• Num covering plasmid clones: 20
• Plasmid unclonability p-value: 0.391744
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGTAACG GTTCAGAGAC TTCTCATTCC AGAAGCAACA CAGTAAGACG CGGAGCACGC 
AGGCTCGTCG CTGGAGTTGG ATTTTATGCT GCATATACAG GGCTCGTACT TCTTTGGGCA 
ATATTCGTAG TGGCGTATAC TGCTTTGCAA TTTCTCGATC AAAAAGACTG GAGCATCATA 
TGCGGAGGTG ACGGAGCGGT AGCACGTGGT ATGCTTGCTG CAGCTGCTCT GCTTGTGTGC 
TTGGCCACGC TTTTGTTTGC ATCTCAATCT AAAATGCACC CAGATCTTTG CCGTAAGAAG 
GTAGAATCCC TCTGTCAAAG CAAGCCGGAT CTGGAAGATG TATTGATAGA GGCAGACGGA 
GCTAGAACAG GGAATGGAGC TAAGGTTGTG CTTAGTGTCG CAACGGTACT GGCAGCCATT 
GCAGTAGTAC TATACCCGGC GATGTTTAAA TTCGCTGGAG TTAGTAATAA TAATCTTTAT 
TCTCGTGTGG GTGAGGTACT TGCTCTTGTT CTTGCTATAT CCGCACTGCT TGCTTTGACG 
CTTGTAGCAG TAAAAACTGA TAGAGCTGCC TCTGTGATGT GGGCAGCGCG TGACATTGCA 
GCCCAGCCAG GGCCACAGCC AGATTCAAAA CTACTCTCTG GTAATCAAGG GGTGTCCGTG 
ACCGAAGAAG GATCAATGAG AGAAGATGAG TCTCTGCTGC TTTTCTCTTG A 

 

Protein sequence

MSNGSETSHS RSNTVRRGAR RLVAGVGFYA AYTGLVLLWA IFVVAYTALQ FLDQKDWSII 
CGGDGAVARG MLAAAALLVC LATLLFASQS KMHPDLCRKK VESLCQSKPD LEDVLIEADG 
ARTGNGAKVV LSVATVLAAI AVVLYPAMFK FAGVSNNNLY SRVGEVLALV LAISALLALT 
LVAVKTDRAA SVMWAARDIA AQPGPQPDSK LLSGNQGVSV TEEGSMREDE SLLLFS