| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | NSE_0057 |
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| Symbol | pnp |
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| ID | 3931805 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Neorickettsia sennetsu str. Miyayama |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007798 |
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| Strand | - |
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| Start bp | 49726 |
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| End bp | 51999 |
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| Gene Length | 2274 bp |
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| Protein Length | 757 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 637900213 |
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| Product | polynucleotide phosphorylase/polyadenylase |
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| Protein accession | YP_505958 |
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| Protein GI | 88608486 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1185] Polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase) |
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| TIGRFAM ID | [TIGR03591] polyribonucleotide nucleotidyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.226918 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTTGAAA TAAAAGAATC CTCCATGGAA TGGGAGGGGA AGAGTTTGCA CATAAAAACC
GGAGAGGTAG CACGTCAGGC TGCTGGTGCA GCTTGCGTTT CATACGGTGG AACCGTTGTG
CTGGCTGTAG TAACTCTTCA GAAGGATACT GCAGCTTCTA AAAAGACTTC TGACTTGTCG
GGTCTAGCAC TTGTGACAAA CTTCCTAGCC AAATCATACG CTCTGGGGCG TATACCAAAC
GGCTTCTTCA AACGGGAAGG CAAGCTCTCA GAGAGAGAGG TGTTGGCCTC CAGGGTGGTT
GATAGAGCCG TAAGACCCTT GATAGAAGAA AATCTCGTTA ATGAGGTAAA CATAGTGTGC
AAACTTCTTG CACATGGCAA TAGAAAGGTT CTACCTGAAA TACCAGCTCT GATAGCGGCC
TCCGCTGCGT TGCAGCTCTC TGGAATTCCA TTTAGCGGTC CCGTTATCGG GGTCGATGTT
GACATGCGTG GGTCAGAAGT CACATGTAAC GAGATCAGGG AGACAGAAGG TGGACTCGAA
CTCTTTGTTG CTTGTACAGA GGAATCGGTT GTAATGGTGG AAGCCGAAGC AAGTGAAGCC
TCTGAAGAGG AGGTTGTAAA TGCCCTTTCA GAGGCGCTAA AAAGCGCAAA ACCGGTTTTT
TCCTTTATCA ACGAGTTTGT TAAAAGCGTC ACTACGGTAA AGCCGATAGG GGTGCTCTAT
GACAATAAAG AGCTCTGTGA GAAGGTGCGT GCAGCATGTA GTGGACAATT AGAGAGCGTC
TATAATGAGA GAATAAGTAG TAAGGAAAAG CGACACAACA AACTTGGCCA GATCTATACA
GATACCTTTG CTCAACTGTC TGACGATGGC TATGCTGAGT CCGAGGTCTT ATTCTTCATT
AAGAAGCTCG AAAAAGAAAT CGTGAGAAAG AACGTTTTGG AGGAGGGCAT AAGACCAGAC
GGGAGGAGCC TGACAGAAAT ACGTCCAATC AGTATCGCTC TGGATTATCT TCCTGGCACT
CATGGTTCTG CTCTTTTCAC TCGTGGTGGG ACACAGAGTT TAGTCGTAGC TACGCTGGGG
TCTTATCAAG ATGAGCAAGT TATGGATGAT ATCGATGGTG AGAGAAGGGA GTCCGTACTT
TTGCACTATA ACTTTTTGCC GTACGCGGTT GGTGAAGTTG GTGCCCTGCG CGCACCAGGA
AGACGGGAAA TCGGGCATGG ACGCTTAGCC CTAAAAGCGG TGAAGGCTGT TCTGCCAGGT
AAAGAGGTTT TCCCTTATAC TTTACGTTTG GTCTCTGAAA TTACAGAATC TGACGGTTCT
TCTTCTATGG CAACAGTATG TGGGTCATCT TTGGCTCTAA TGGATACTGG AGTTCCTATT
ACGAAGCATG TAGCCGGAAT AGCTATGGGC TTGATAACTG ATGGAGTAAG GTCTGCCGTT
CTGAGTGACA TCTCGGGTGA TGAAGACATG CTCGGAGATA TGGACTTCAA GGTTGCGGGT
ACACGAAATG GAATTGTCGC ACTTCAGATG GATATGAAAG TGCGTGGCAT AAGTATAGCA
ACAATTAGGG ATGCACTAAA TCAGGCACTG GCTGGAAGGT TGCACATCCT TGAAAAGATG
GAGCATGTAA TTGCTAAGCC CCGGGAAAGT CTAAAGGATT CGGCCCCAAA GATACTGTGC
TACAAGATTG ATAAGGATGT CGTACATAAG GTGATAGGCA GTGGTGGGAA AACTATTAGG
GGGATTTCGT CTGATACCTC TGCAAAGATT GATATAGATC AGAATAACTA CGTTTATATA
ATGGCTGACA CCGAGGAGGC ATTGATGGAA GCAAAAACTA GGGTTGATAT GGCTTCAGGT
GCTTCTGATT CCAATGTCCC GCAGCTTAAA ATTGGTGAAC TATATGACGG AAAAATAGTG
AGCGTAGTTG ACTTTGGCTT GTTCGTTGTT CTTCCAAATA AGCAGGAGGG ATTGGTCCAT
ATTAGTGAAA TTAGTAAGAA CAGGGTTAAT GATATACGCG CAGACTACAC TGAAGGACAG
GCAGTTACGG TGCGGATCAA GGATATAGGT TCGGATGGAA AAATTAAGCT GACTATGCGC
ATTGATGAGG ATAGAGTAGG TAGTGGTGGA AGTAGCTCCT CACCTAAGAA GCGTTTTGGA
GCCCATCCTA GAAAAAATGG TAAGGATAAC CGATCCAATA ACAGTGAGAG GGGTTTCAAC
GAGAGGTCCG GCTCTGCTGA AGGTTCGTCT ATTAGTAGAA AGCGATTTTT CTAA
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| Protein sequence | MFEIKESSME WEGKSLHIKT GEVARQAAGA ACVSYGGTVV LAVVTLQKDT AASKKTSDLS
GLALVTNFLA KSYALGRIPN GFFKREGKLS EREVLASRVV DRAVRPLIEE NLVNEVNIVC
KLLAHGNRKV LPEIPALIAA SAALQLSGIP FSGPVIGVDV DMRGSEVTCN EIRETEGGLE
LFVACTEESV VMVEAEASEA SEEEVVNALS EALKSAKPVF SFINEFVKSV TTVKPIGVLY
DNKELCEKVR AACSGQLESV YNERISSKEK RHNKLGQIYT DTFAQLSDDG YAESEVLFFI
KKLEKEIVRK NVLEEGIRPD GRSLTEIRPI SIALDYLPGT HGSALFTRGG TQSLVVATLG
SYQDEQVMDD IDGERRESVL LHYNFLPYAV GEVGALRAPG RREIGHGRLA LKAVKAVLPG
KEVFPYTLRL VSEITESDGS SSMATVCGSS LALMDTGVPI TKHVAGIAMG LITDGVRSAV
LSDISGDEDM LGDMDFKVAG TRNGIVALQM DMKVRGISIA TIRDALNQAL AGRLHILEKM
EHVIAKPRES LKDSAPKILC YKIDKDVVHK VIGSGGKTIR GISSDTSAKI DIDQNNYVYI
MADTEEALME AKTRVDMASG ASDSNVPQLK IGELYDGKIV SVVDFGLFVV LPNKQEGLVH
ISEISKNRVN DIRADYTEGQ AVTVRIKDIG SDGKIKLTMR IDEDRVGSGG SSSSPKKRFG
AHPRKNGKDN RSNNSERGFN ERSGSAEGSS ISRKRFF
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