| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | NSE_0050 |
|---|
| Symbol | |
|---|
| ID | 3931386 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Neorickettsia sennetsu str. Miyayama |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007798 |
|---|
| Strand | - |
|---|
| Start bp | 40371 |
|---|
| End bp | 41126 |
|---|
| Gene Length | 756 bp |
|---|
| Protein Length | 251 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 637900206 |
|---|
| Product | putative membrane proetin |
|---|
| Protein accession | YP_505951 |
|---|
| Protein GI | 88608506 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0670] Integral membrane protein, interacts with FtsH |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 32 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGTATAATG GATGTTTGTT TGTTCGTAGC TATTTTGCTT ATATGAGTTT TATCAACCGT
TATTCTTCTA CTTCAACAGA TTCTGCTTAT AGAAACGAAG GGCTGAGAAT GTATATGGTG
AAGGTCTTCA ACTATATGGC TGCGGCTCTT GGGATAACTG GTCTAACTGC TTTCTTTGTT
GCAAGCTCTC CGGCTATGCT CTCCTTGTTG TATCAAACAC CACTCCAGTG GGTCGTGATG
TTTGCCCCTG TAGTGTTTGT TATAGTCTTT AGTACGAGGA TTTCAGGTAT GACCTCCGAA
AGAGCGAAAG TTTTGTTCTG GTGCTTCTCG GTGCTTATGG GACTTTCTCT ATCTTGGGTG
TTCATTGCTT ATACTGGCGC TAGCATAGCG AGGGTCTTTT TTATTGCAGC GACGATGTTT
GGAGCAATGG CAATATACGG GAATAATACT AGGACAGATT TGACGGGAAT GGGCTCTTTT
CTTACGATGG GAGTCGTGGG TATTCTGATT GCTGCTTTGG TGAATGTCTT TCTTGCTAGT
CCAGCTATTT ATTTCGCTGT GTCCGCGCTT GGTGTTGTGA TATTTACTGG TCTTACCGCT
TATGATGTAC AGCGCATTAG GGATTTTTAT TATTTCTCTG TCAATGCAGA TGAAGAGACA
CTTTCGAAGA TCGCTGTAGT TGGTGCACTT ACACTATACT TCGATTTTAT TAATATTTTT
ATTAGCTTAC TAAACCTCAT GGGTGAGCGG AAGTAG
|
|---|
| Protein sequence | MYNGCLFVRS YFAYMSFINR YSSTSTDSAY RNEGLRMYMV KVFNYMAAAL GITGLTAFFV
ASSPAMLSLL YQTPLQWVVM FAPVVFVIVF STRISGMTSE RAKVLFWCFS VLMGLSLSWV
FIAYTGASIA RVFFIAATMF GAMAIYGNNT RTDLTGMGSF LTMGVVGILI AALVNVFLAS
PAIYFAVSAL GVVIFTGLTA YDVQRIRDFY YFSVNADEET LSKIAVVGAL TLYFDFINIF
ISLLNLMGER K
|
|---|
| |