Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | NSE_0023 |
Symbol | |
ID | 3931447 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Neorickettsia sennetsu str. Miyayama |
Kingdom | Bacteria |
Replicon accession | NC_007798 |
Strand | + |
Start bp | 18761 |
End bp | 21073 |
Gene Length | 2313 bp |
Protein Length | 770 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 637900180 |
Product | hypothetical protein |
Protein accession | YP_505926 |
Protein GI | 88608147 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTACACAA AGATATGTGA AGCAATTAAA AGTTCGGACA TTCTTACTTT AAGGTGTCTA ATGCAAGAGG CAGGATTGGA GGAAGCGAAC GGTACTGCCT CAGCACAAGG TCGACCTCTC TGGTCCATGG TTGATTCTGA TGGGCGTAGT GTTCTGCAAG TTGCTGTAGA AAGTCAAAAT ACAGGTGTGC TTAAATGCGT GATGGAGGCA CTACCCGGTA ACTGCTTAGT AGATCTGTGT GCTAAGAAGA CAAGTACGAG CCATCCTTTT TTCCCTGAAA GCACCCCACT GCACACCGCA ATTGCAGTTG GGCGCATGGA AGTCCTGGAG TCACTACTAC GCGGAATGTT AAGCGCGCGT GGACAAAATG GTAAACCGCC ATCTAGTACT GTGGTTGTTT GGCATACGGC TGATGCAAAT GGGCGAACAC CTTTAGCCGC CGCATTGGCC ACCGGCAAGC TAGAGATTGT GAAGCTAGTC CTTGGAGCAA TAAAGACTCT GGAGCGAGAT ATGCAGACGG CTAGAGGAGA TCGTGTACCA CTGGTCCCCG GTATTCTTCA AATTGATGAT ATCAGAGTTA GGGGTGATAA CGGACTTAAT ATGGCTGTAT CTACAGGTAA TGTGGGTATA GTTGAGGTTC TGATCGATGC TCTGACTCCT GAGGAGCTGG CACCTATACT AACAAGGTGT AATTTAGTGG GTGACACTGC ACTTGACCAG GCCGCGCGTG CAGGAAATGT AGACATTGTG AGGCTTTTAG TCAAAAAGCT GGGGGATTTG TATGAGCCGT GGGTTAGTAC ACCTTTCCAG GTTGTTGTGG AGTCCTGCGC GGAGAGTAAA TACAAAGGGA ATGGAGCGCA AGTTCCAGAG CACTTTTCAA TGCGTCTTTT GGGTAACGCA GTTTCGAGTG GTAATGCTCA AGTTGTTAAG GAAGTTTTAG GACCTCTGTC TATCGAAGAG CGGTATAAGC TGTTGAGTCG TACCAGTTGG GGTTATCCTT ACCCTGCACT ACACCTGGCA TTCTCCTCAG GGGCACACGA ATGCGTAAAA ATAATGCTTG ACTCGCTTGT TGCTTGTCCT GGTGGAGGTA CGAAGTATGT GTCAAAAGTT CTTGCTCAAC GTTCCGGTGG GCTTACTCCG CTGCATTGTG CCGTTGATGC CAAGTCAGTT GCGGTAGTAC AAGGGTACGG ACTACCGAAG GGGGTCCTGT TCGGGCTACT TACGGCTGGA GGCTCGTCCT GTTCTCCTGA AGGACCTGTT TACGTGCCTG ATGGTATGAA TCCACTTCAA GCTATGCTTG CTGGTCCTAC TGGTGATGGG AATCCTGTTC CTGGGGCAGT TGGTGTAATT AGGGCTATGC TGGATCTTTT AGAAGGGGAT GCAGTTTTGA TGCAGCGTGT GCTTTCTTCA ATGGATGCGG GAGGACGTAA CACTCTGTAC ACTTTTGCAA GTCTTGTAGG TTCAAGGGGT GTTTCTGCCA CTGACTTTGT GACTATGCTC AACTACCTTG AAGGCAGAGT AAACCTCAGG ACTTTACTCG AGCAAAAAAA CATGACGGAG GATGTCTCTA CACTTGATGT TGTTCACGAA GCGGAACACA ATTTGTACAG TTGGGGTTTT AGTCTGAACG ATCATGTTTC CCAAGCGTTA AATAGACAAA GAGGAGTTTC AAAGAGCCGG GCTTCCAGGT TAAAGGTAGC GGGTGATGCT GCAGTGTTAT CCAGTTTTTT CTTGTCCTGC ATATCAGGGC TTATTGTGGT ATGTAGCGCC CTTTATAATG TATGTTCTAC GGGAGTTAAA AAGAAAAGCG CTGGATTTAC CGTATTTGAA ATAGCATACA TTGTATTTGC TTTCTCTGTC GTTATGCTTC TCCTCACTTT TTTCTGTATA ACTCCAGGTA TGCACGGTGC AGCTAATCGG TGTGCTGTGA TAACAGGCGA TCCTAGAGTA AACATCCCTG AGCCGAGTTT TAATGACGGG ATATCGATAT GCGCAAACAC AGAGATCCAA TTCAGACCTG AAGACGTCGA GAAAATAGAA ATGGAAAGGT TGCATCTTAG AAGCAAAAGA GACCCAATGG CGGTCTTTTC TTCATCTCCT TCTCTTTCCT CCTCCGCTCT GAGTGCACGA CCTGTACCTG GTTTGCTTGT TGAACAGTTG AGTGCCTTCC ATGTACGCGA TCCGGGCCAC CACTGTTGTT CTACATCTGA GAATGAGGGA TCCTATGCGT TGGAGGAGTC TCCTGGTACA GGGATACAGG GTTTGGCAGC GGAGGGACTA TGTGATGAAC AACAGAAAGG CGTTGCTGAG TAA
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Protein sequence | MYTKICEAIK SSDILTLRCL MQEAGLEEAN GTASAQGRPL WSMVDSDGRS VLQVAVESQN TGVLKCVMEA LPGNCLVDLC AKKTSTSHPF FPESTPLHTA IAVGRMEVLE SLLRGMLSAR GQNGKPPSST VVVWHTADAN GRTPLAAALA TGKLEIVKLV LGAIKTLERD MQTARGDRVP LVPGILQIDD IRVRGDNGLN MAVSTGNVGI VEVLIDALTP EELAPILTRC NLVGDTALDQ AARAGNVDIV RLLVKKLGDL YEPWVSTPFQ VVVESCAESK YKGNGAQVPE HFSMRLLGNA VSSGNAQVVK EVLGPLSIEE RYKLLSRTSW GYPYPALHLA FSSGAHECVK IMLDSLVACP GGGTKYVSKV LAQRSGGLTP LHCAVDAKSV AVVQGYGLPK GVLFGLLTAG GSSCSPEGPV YVPDGMNPLQ AMLAGPTGDG NPVPGAVGVI RAMLDLLEGD AVLMQRVLSS MDAGGRNTLY TFASLVGSRG VSATDFVTML NYLEGRVNLR TLLEQKNMTE DVSTLDVVHE AEHNLYSWGF SLNDHVSQAL NRQRGVSKSR ASRLKVAGDA AVLSSFFLSC ISGLIVVCSA LYNVCSTGVK KKSAGFTVFE IAYIVFAFSV VMLLLTFFCI TPGMHGAANR CAVITGDPRV NIPEPSFNDG ISICANTEIQ FRPEDVEKIE MERLHLRSKR DPMAVFSSSP SLSSSALSAR PVPGLLVEQL SAFHVRDPGH HCCSTSENEG SYALEESPGT GIQGLAAEGL CDEQQKGVAE
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