| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | NSE_0020 |
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| Symbol | truA |
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| ID | 3932291 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Neorickettsia sennetsu str. Miyayama |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007798 |
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| Strand | + |
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| Start bp | 17293 |
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| End bp | 18024 |
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| Gene Length | 732 bp |
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| Protein Length | 243 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 637900177 |
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| Product | tRNA pseudouridine synthase A |
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| Protein accession | YP_505923 |
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| Protein GI | 88608581 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0101] Pseudouridylate synthase |
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| TIGRFAM ID | [TIGR00071] pseudouridylate synthase I |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCGCTACA AGGCAATAGT TGAATATGTT GGTACTGGTT TTTCTGGCTG GCAGAAACAA
ATGTCCGCTC CATCTGTGCA GGAAGAGTTG GAATCAGTCC TCAGTTTTTT GTTAAAGGAG
AAAATAGCAG TTAATGTTGC TGGAAGAACA GATGCAGGAG TGCACGCTCT CGGACAGGTC
TTTCATTTTG ATGCACGTGA ATCTACTTTG CAGCCTTTTC AAATAGTAAA TGCGGTAAAT
TATCATTTGA AAGAGAAGTT AATAGTTCTG CTGAAGATAG AGATTGTTGA TGAAACCTTT
GATGCCAGAT TTTCTGCTAT TAGGAGACAC TATCAATACA AAATCACAAA CAGAAAGACA
CCACTGGCAG TATTTAAAAA CCGCTCCTGG CATGTGCCGC AGACTTTAAA TCTGGATCTC
ATTAGGGAGC AAGCTCAATA TCTTGTTGGA AAACACGATT TTCAGAGTTT TCGTTCATCC
AAATGTGGTG CTTCTAACGC TATTAGGACC CTAGATAGGT TGGAAGTTGA GAAAAACGGA
GAGGAAATGA TTTTTCATGC CTCTGCTAAG TCGTTTTTGC ATCATCAGGT GCGGATAATG
GTTGGTACTT TGGTTGCCAT TGCATCTGGA AAACTCATGA GTGTTACAGA AATTCTCTCT
AAGAAGAATC GTCGTTACGC TGGCCCGACT GCTCCTCCAT GTGGTTTATA TCTCCTGAAA
GTGGATTATT AG
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| Protein sequence | MRYKAIVEYV GTGFSGWQKQ MSAPSVQEEL ESVLSFLLKE KIAVNVAGRT DAGVHALGQV
FHFDARESTL QPFQIVNAVN YHLKEKLIVL LKIEIVDETF DARFSAIRRH YQYKITNRKT
PLAVFKNRSW HVPQTLNLDL IREQAQYLVG KHDFQSFRSS KCGASNAIRT LDRLEVEKNG
EEMIFHASAK SFLHHQVRIM VGTLVAIASG KLMSVTEILS KKNRRYAGPT APPCGLYLLK
VDY
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