Gene Mhun_3170 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMhun_3170 
Symbol 
ID3924715 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanospirillum hungatei JF-1 
KingdomArchaea 
Replicon accessionNC_007796 
Strand
Start bp3465596 
End bp3467425 
Gene Length1830 bp 
Protein Length609 aa 
Translation table11 
GC content50% 
IMG OID637898775 
Producttype II secretion system protein E 
Protein accessionYP_504571 
Protein GI88604393 
COG category[U] Intracellular trafficking, secretion, and vesicular transport
[N] Cell motility 
COG ID[COG0630] Type IV secretory pathway, VirB11 components, and related ATPases involved in archaeal flagella biosynthesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGTCA GGGTGGGGAG TTTAAAAAAA GAGAAAAATG GTGTCAAGGG GAAGGATACG 
GGAGCTGGAG ATCCAGCTGC GGCAAAACCT GCCCCTCCGA CAAAACCCTT GAAATTATCC
GCGCTCGGTG GAAAAAAGAA AGAGGCTGCT GAAAAACCGT CCGGGCTTCG TCGTCTTGGG
AAAAAGGATG TACAAGTGCC GCAAGTTCCT GAATCCGTTT CCTCTGAACC GAAAAAGAAG
TCCCTGTTCA GTTCATTTAG TAAGATAGCT CCACTTGCAA AGAAGCGTGA GCAGTATGAT
CCCAAGGTTC ATGGGATGAT GGTCAACCTC ACCTTTGAAC CGCCGCCGGG GACCGAGGAG
ATTGAGGTAT ATCCGGTCAA TCCCCCATTT GCATACATCC GTATCACCTA CAATTATATC
ACGCACGAAT ACCTCTACGA GGTTGTTGAG CCCATCTATA CCGATGCAGA AAAAAAACTC
CTTGACGAGA TTAAAAAAGG GATCTTTGAG CGGGTGAATG TGAACACCCG GCAGATCTCC
AGGGAGACTG CGGCAGAGAC CCTTGAGTCT ATGATGAATG AGGTTCTTGC CGATTATGCC
ATCTCTCTGG ATCCCCTGAC CTATGAGAAG ATCCACTACC ATCTGAAAAA GGATTTTCTT
GGTGACGGTC TTGTCGATCC GGTGATGCAT GACCGGTATA TCGAAGATAT CTCCTGTGAC
GGTGTGGGAA GGCCGCTTTT TGTTTATCAC TCCAGATATG AATCTATAGA ATCAAACCTT
TTTTACACCG ATGCTGCTGA ACTTGATTCA TTTGTAACCA AACTGGCCCA GAGGGCAGGA
AAGCACATAT CAGTTGCAGA TCCCATGCTC GATGCCACTA TGCAGGATGG CTCCCGTATC
CAGATGACAC TCGGCTCTGA GGTGACTGCT CATGGCTCTA CCTTTACCAT ACGTAAGTTC
AAGGATGAAC CCATCACCCC GACCGACCTG ATTGAGTGGG GTACATTCTC ACCTCTCTCT
ATTGCATTTC TCTGGCTTGC GGTCGAGAAC GGAAAGTCAT GTATCTTTGC CGGGGGGACG
GCATCAGGAA AGACCACCTC ATTGAACGCA ATATCCCTCT TTATCCCGCC GCTTGCAAAG
ATCGTCACCC TAGAAGATAC TCGTGAACTG AAACTGCCTC ATTCCAACTG GATCCCGAGT
GTCACTCGTG AGTCCTTTGA TGTGAGTGGG AAAGGGGAGA TTGATATGTA TGAGCTCCTG
AAGGCTGCGC TTCGTCAGCG TCCGGAGTAT CTGATTGTGG GTGAGGTCCG TGGCCGTGAA
GCGCTCACCC TCTTTCAGGC GATGTCAACC GGCCACGTCA CTTACTCGAC CATGCACGCG
GATTCGGTAT CCTCAGCAGT CCATCGTCTT GAAAACCCGC CCATCTCTGT GCCCAGGAAC
ATGCTTTCAG CGCTGAACCT GGTGTGTGTT CAGATACAGG CACGGGTAGG TGGTCAGCGC
ATCAGGAGGA ACAAACAGAT CATCGAGGTT CTTGACATCG ATCCCAGGAC AAATGAACTG
ATCACGAATG AGGTGTTCAG GTGGCGGCAG GCAACCGATG AGATCTCCTA CTCAGGAAAG
TCATTCATTC TTGAAGAGAT TATGGAGGCA CACGGGTGGG ATGAGGAACG GATCAGGCGT
GACCTGCTCC AGCGACAGGA GGTCCTTGAA TGGATGCGTG AGAAGAAGAT CCGTGACTTC
CGTGATGTGA GCAAGATTGT CGTCTCGTAC TTCAGGGATG CCGAAACCCT GATGGAGCAG
ATACGGTCTG GTGGCAATGA ATTCATATGA
 
Protein sequence
MKVRVGSLKK EKNGVKGKDT GAGDPAAAKP APPTKPLKLS ALGGKKKEAA EKPSGLRRLG 
KKDVQVPQVP ESVSSEPKKK SLFSSFSKIA PLAKKREQYD PKVHGMMVNL TFEPPPGTEE
IEVYPVNPPF AYIRITYNYI THEYLYEVVE PIYTDAEKKL LDEIKKGIFE RVNVNTRQIS
RETAAETLES MMNEVLADYA ISLDPLTYEK IHYHLKKDFL GDGLVDPVMH DRYIEDISCD
GVGRPLFVYH SRYESIESNL FYTDAAELDS FVTKLAQRAG KHISVADPML DATMQDGSRI
QMTLGSEVTA HGSTFTIRKF KDEPITPTDL IEWGTFSPLS IAFLWLAVEN GKSCIFAGGT
ASGKTTSLNA ISLFIPPLAK IVTLEDTREL KLPHSNWIPS VTRESFDVSG KGEIDMYELL
KAALRQRPEY LIVGEVRGRE ALTLFQAMST GHVTYSTMHA DSVSSAVHRL ENPPISVPRN
MLSALNLVCV QIQARVGGQR IRRNKQIIEV LDIDPRTNEL ITNEVFRWRQ ATDEISYSGK
SFILEEIMEA HGWDEERIRR DLLQRQEVLE WMREKKIRDF RDVSKIVVSY FRDAETLMEQ
IRSGGNEFI