Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mhun_3088 |
Symbol | |
ID | 3921965 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanospirillum hungatei JF-1 |
Kingdom | Archaea |
Replicon accession | NC_007796 |
Strand | - |
Start bp | 3364550 |
End bp | 3365836 |
Gene Length | 1287 bp |
Protein Length | 428 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 637898698 |
Product | ABC transporter related |
Protein accession | YP_504494 |
Protein GI | 88604316 |
COG category | [G] Carbohydrate transport and metabolism [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1134] ABC-type polysaccharide/polyol phosphate transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.204093 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.388179 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATGATG TTGTAATCAG GGTTGAAAAT GTCAGTAAAA TCTATCAACT CGGTGTTATT AATCATGGAA CATTGCGAAA TGACCTGCAG AGCTGGTGGG CCCACTTAAG GGGCAGAGAA GATCCAAATC GCCTGATTGA TATCTATTCT GAAGAGAAAA ACCGATTGAA AGGTGATCTT TTTTATGCAC TAGATAACAT CTCCTTTGAA GTTAAGAAGG GAGAAAAGGT CGGGATAATC GGGAAAAACG GGGCCGGGAA ATCCACCCTC CTGAAGATCT TGTCCCGGAT TACTCGTCCG ACTGAGGGAA GGGTCCGGAT TAACGGAAGA ATTGCAAGTT TGCTTGAGGT TGGGACTGGT TTTCATCCCG AACTTACCGG GAGAGAAAAT GTCTATCTCA ATGGTTCGAT TCTAGGGATG ACACGGGCAG AGATAACCGA AAAATTCGAT GAAATTGTTG ATTTTGCTGA AGTTCGCGAA TTTATCGATA CTCCGGTCAA GCGATATTCA AGCGGGATGT ATGTCAGGCT TGCATTTGCT GTGGCTGCCC ACCTTGAGCC CGAAATACTG ATTGTTGATG AGGTTCTTGC TGTTGGTGAT ATCGCTTTTC AAAAAAAGTG CATCGGAAAG ATGGGTGATA TCTCGTCAGA GGGTAAAACT GTGCTTTTTG TCAGCCACAG TATGGCCGCA GTCAAGCAAT TATGCCCGAG AAGTCTTTTG ATACGTGATG GGAAGATCAT CGCTGACGGG CCTTCAGAAA ATATTATCGA TGAGTACCTT CTGCAGTCTG GTTCGGTGGA TGGGATAACA GAAGCAACAT TTGATGAAGA TCGGGAAAAG GAAGCACAAT TAAGGAAAAT CCGCGTTTTA TCACAGGAAG GGAAAGTGAA ATATAGGTTT TCCTGTGATG AACCAGTTAT TCTTGAATTA GAAATGCATT TTAATAAAAA GATACCTGGG TTGTATGGGT ATATGACGAT ATCCAGATCT GATGGAACTC TTGTTATGCA ATCTGACTCT TTTGACTCTT CCCCGAATCC GCTTGATGAC GTGGAAATAG GTACCCATTA TTTTACGATA ACCATTCCTG CACGATCTCT TGCTCCAAAT AAGTATTCAG TATATCTAAA CTTTACTAGT AATAGGGCGA GGAGTTGGAA TGTTGATTCA CCAAGAACGG TCTGCTCTTT TGAGCTGGAG GATCATACTT CCCGGAGGGG GAATAATAGG CAGGGGTTTT TTAGTACGAT GTTGGAGTGG AAAGAGTGTA AAAAGAGATC ATTTTAG
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Protein sequence | MNDVVIRVEN VSKIYQLGVI NHGTLRNDLQ SWWAHLRGRE DPNRLIDIYS EEKNRLKGDL FYALDNISFE VKKGEKVGII GKNGAGKSTL LKILSRITRP TEGRVRINGR IASLLEVGTG FHPELTGREN VYLNGSILGM TRAEITEKFD EIVDFAEVRE FIDTPVKRYS SGMYVRLAFA VAAHLEPEIL IVDEVLAVGD IAFQKKCIGK MGDISSEGKT VLFVSHSMAA VKQLCPRSLL IRDGKIIADG PSENIIDEYL LQSGSVDGIT EATFDEDREK EAQLRKIRVL SQEGKVKYRF SCDEPVILEL EMHFNKKIPG LYGYMTISRS DGTLVMQSDS FDSSPNPLDD VEIGTHYFTI TIPARSLAPN KYSVYLNFTS NRARSWNVDS PRTVCSFELE DHTSRRGNNR QGFFSTMLEW KECKKRSF
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