| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mhun_3074 |
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| Symbol | |
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| ID | 3922332 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanospirillum hungatei JF-1 |
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| Kingdom | Archaea |
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| Replicon accession | NC_007796 |
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| Strand | - |
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| Start bp | 3348160 |
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| End bp | 3348732 |
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| Gene Length | 573 bp |
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| Protein Length | 190 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 637898684 |
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| Product | dTDP-4-dehydrorhamnose 3,5-epimerase |
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| Protein accession | YP_504480 |
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| Protein GI | 88604302 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1898] dTDP-4-dehydrorhamnose 3,5-epimerase and related enzymes |
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| TIGRFAM ID | [TIGR01221] dTDP-4-dehydrorhamnose 3,5-epimerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.693771 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.211437 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGGAAAAT TAACCATAAC AAAAACACCA CTTGCGGGTA TCCTTCTGGT AGTGCCGCAG
TACTTTAAAG ACTCGAGGGG TTTTTTCGTT GAAAGTTACA ACAAAAAAGA TTTCTCTCAT
GCAGGAATTA CTGATGAATT TGTCCAGGAC AATCATTCAA AATCACAAAA GGGAGTCCTT
CGTGGTCTTC ACTACCAGTA CCCACACGCG CAGGGAAAAC TTGTCCGGGT ACTGAAAGGC
TCTATCTATG ATGTTGCGGT TGATATCCGG ATAGGATCAC CCACTTATGG AAAGCCTTTT
GCAGTGACCC TGCGTGAGAA TGATCCTGCA ATGCTGTATA TTCCCGTAGG TTTTGCACAC
GGTTTTCTGG CTCTTGAAGA CGATACCGAA GTTATGTACA AGGTTACCGA TCTCTATTAT
CCATCGGGAG ATGCCGGCCT GTTATGGAAT GATCCAGACT TGAACATTCC ATGGCCTCTA
GATATAATTG GCATAAAAGA GCCGATTTTA TCTGAAAAAG ATACAAAGCA TCCGATATTA
TCTGAACTCA GGTCACCTTT CACTTATGTG TAG
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| Protein sequence | MGKLTITKTP LAGILLVVPQ YFKDSRGFFV ESYNKKDFSH AGITDEFVQD NHSKSQKGVL
RGLHYQYPHA QGKLVRVLKG SIYDVAVDIR IGSPTYGKPF AVTLRENDPA MLYIPVGFAH
GFLALEDDTE VMYKVTDLYY PSGDAGLLWN DPDLNIPWPL DIIGIKEPIL SEKDTKHPIL
SELRSPFTYV
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