Gene Mhun_3001 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMhun_3001 
Symbol 
ID3922889 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanospirillum hungatei JF-1 
KingdomArchaea 
Replicon accessionNC_007796 
Strand
Start bp3280631 
End bp3282433 
Gene Length1803 bp 
Protein Length600 aa 
Translation table11 
GC content51% 
IMG OID637898610 
ProductPEGA 
Protein accessionYP_504407 
Protein GI88604229 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.221901 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCACCAC TCCGGTTATG GATACTCAGC TCCCTGTTAA TATTGGCATT GACAGGTGTT 
GGGATCTCTG AAGAACTCTC CAATCAGGCA GAACCAACCG GGTTTATTCC CGATGGCTAT
GAAGATGACA ATCCCCCGTA TTATCCGACT GACTACCCGA CCAATTCCCC CACCTATATC
CCGACAGATA TACCCACAGA ATATCCAACT ATTACCATTG AACCAACACC ACAGGAGCAG
TATGGATGGG TTTTAATAAA CTCGGTCCCG TCTGGTGCCA TGGTCACCTT TGATGGATCA
TATCAGGGTC TGAGTCCGGT AACGGTGCAG GTCTCACTGA CTGAATCCAG GTTCCATCAG
ATCTACATCT CAATGGACGG ATACCAGGAC TGGAGCACCT CCCTTTCAGA ACTCCCCGCA
CCAGGCCAGA CAATTCCGGT CAATGCAATC CTTGTGCCGA TGGAACCGAC AATAACCCCT
ACGTATACCC CGACCTGGAC TCCTACCGAG ACACCAACAT GGACCCCGAC GCCAACCCCC
ACTATGATCG GTTCTGATTA TGGATGGGTG TATATTGAGT CAGTGCCCTC CGGTGCTGAA
GTAACCTTTG ATGGTACCTA CCAGGGCTCT GCCCCGGCTC TTGTCAAAGT GTATACGACT
GGCACCCCAT CACACCAGAT CCTCGTCAGA ATGACCGGAT ATTATGACTG GACCTCGTCC
CTGAGAGAGA ATCCGCTTCC GGATCAGACC ATCCCCATTA CTGCCACTCT GGTCCCGAAG
GCACAGTATG GGAGTATCCG GGTGACGTCA CATCCGACGA AGAGTATTGC AATCCTTGAT
GGAGGAAACC AGGATCTGAC ACCCTGCACG TTCTCAGACC TGATGCCCGG GCTTCATACA
ATCAAAGTTA TCAAAGACGG ATATCAGCCA TTCATGTCGC AGGTCCGGGT AAACGCAGGA
TCACAGTCAC AAATCCAGGC TCAGCTGAAT CAGATAATCC AGACCGGAAC ACTCTATGTT
TCCAGCACTC CTTCCGGTGC AGACATCCAG CTTGATGGCA TATACTACGG ACAGACACCA
TATACCCTCT CTGCATCTGC CGGCAGCCAT AGTCTCATGC TCAGGCTGGC GGGATATAAC
ACCTGGAAAT CCGGTGTAAC AATTTCTGCA GGTCAGCAGA ACCAGATTTC AGCCAGCCTT
GAACCACAGG GACCGCAGTT AGGGGCAATC CAGGTTGCAA GCATGCCCGG ATCCTCACAG
ATTTTCCTGA ATGACAATTA TGAAGGGAAG ACGCCCGATA TCGGATACCT GGATATCCCC
ATGCTCAATC CGGGTATATA TGCAATCAGG ATTAGCCATC CCCAGAACCA GGATTACCAG
GGAACGGTTG CTGTTAATGC AGGACAGGTG AGTACGGTCA ATGTTGCCCT GCAGGCAGCA
CCTGTTCCGG CAACTGTTAA TGGGACCCTG ATGGTGCAAT CCAATCCTTC AGGGGCAGCA
ATATTCCTTG ATAACCTGTT TAAAGGGGTC ACACCACTGA ACCTTCCTTC AGTACCCCCT
GGTGAGCATG CCCTGACCCT TCGGATAAAT GGATATGATG ATGCTGTCAG GCAGGTCAGC
ATAACTGGTG GGAATACCAC GGATGTTGTT ATTGAGATGG TACCGACTGC ACCTTTGACT
CAGGAACCGA CACAGACCTC TGAGCCGACG CAGACAAAGT CACCCGCACC AATGTTTGCA
CTCTGTACCG GAATCGGCCT TGCTGCAGTA GCTCTCGTAT TGTCCCGACG ATCTGATCGG
TGA
 
Protein sequence
MAPLRLWILS SLLILALTGV GISEELSNQA EPTGFIPDGY EDDNPPYYPT DYPTNSPTYI 
PTDIPTEYPT ITIEPTPQEQ YGWVLINSVP SGAMVTFDGS YQGLSPVTVQ VSLTESRFHQ
IYISMDGYQD WSTSLSELPA PGQTIPVNAI LVPMEPTITP TYTPTWTPTE TPTWTPTPTP
TMIGSDYGWV YIESVPSGAE VTFDGTYQGS APALVKVYTT GTPSHQILVR MTGYYDWTSS
LRENPLPDQT IPITATLVPK AQYGSIRVTS HPTKSIAILD GGNQDLTPCT FSDLMPGLHT
IKVIKDGYQP FMSQVRVNAG SQSQIQAQLN QIIQTGTLYV SSTPSGADIQ LDGIYYGQTP
YTLSASAGSH SLMLRLAGYN TWKSGVTISA GQQNQISASL EPQGPQLGAI QVASMPGSSQ
IFLNDNYEGK TPDIGYLDIP MLNPGIYAIR ISHPQNQDYQ GTVAVNAGQV STVNVALQAA
PVPATVNGTL MVQSNPSGAA IFLDNLFKGV TPLNLPSVPP GEHALTLRIN GYDDAVRQVS
ITGGNTTDVV IEMVPTAPLT QEPTQTSEPT QTKSPAPMFA LCTGIGLAAV ALVLSRRSDR