Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mhun_3001 |
Symbol | |
ID | 3922889 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanospirillum hungatei JF-1 |
Kingdom | Archaea |
Replicon accession | NC_007796 |
Strand | + |
Start bp | 3280631 |
End bp | 3282433 |
Gene Length | 1803 bp |
Protein Length | 600 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 637898610 |
Product | PEGA |
Protein accession | YP_504407 |
Protein GI | 88604229 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.221901 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCACCAC TCCGGTTATG GATACTCAGC TCCCTGTTAA TATTGGCATT GACAGGTGTT GGGATCTCTG AAGAACTCTC CAATCAGGCA GAACCAACCG GGTTTATTCC CGATGGCTAT GAAGATGACA ATCCCCCGTA TTATCCGACT GACTACCCGA CCAATTCCCC CACCTATATC CCGACAGATA TACCCACAGA ATATCCAACT ATTACCATTG AACCAACACC ACAGGAGCAG TATGGATGGG TTTTAATAAA CTCGGTCCCG TCTGGTGCCA TGGTCACCTT TGATGGATCA TATCAGGGTC TGAGTCCGGT AACGGTGCAG GTCTCACTGA CTGAATCCAG GTTCCATCAG ATCTACATCT CAATGGACGG ATACCAGGAC TGGAGCACCT CCCTTTCAGA ACTCCCCGCA CCAGGCCAGA CAATTCCGGT CAATGCAATC CTTGTGCCGA TGGAACCGAC AATAACCCCT ACGTATACCC CGACCTGGAC TCCTACCGAG ACACCAACAT GGACCCCGAC GCCAACCCCC ACTATGATCG GTTCTGATTA TGGATGGGTG TATATTGAGT CAGTGCCCTC CGGTGCTGAA GTAACCTTTG ATGGTACCTA CCAGGGCTCT GCCCCGGCTC TTGTCAAAGT GTATACGACT GGCACCCCAT CACACCAGAT CCTCGTCAGA ATGACCGGAT ATTATGACTG GACCTCGTCC CTGAGAGAGA ATCCGCTTCC GGATCAGACC ATCCCCATTA CTGCCACTCT GGTCCCGAAG GCACAGTATG GGAGTATCCG GGTGACGTCA CATCCGACGA AGAGTATTGC AATCCTTGAT GGAGGAAACC AGGATCTGAC ACCCTGCACG TTCTCAGACC TGATGCCCGG GCTTCATACA ATCAAAGTTA TCAAAGACGG ATATCAGCCA TTCATGTCGC AGGTCCGGGT AAACGCAGGA TCACAGTCAC AAATCCAGGC TCAGCTGAAT CAGATAATCC AGACCGGAAC ACTCTATGTT TCCAGCACTC CTTCCGGTGC AGACATCCAG CTTGATGGCA TATACTACGG ACAGACACCA TATACCCTCT CTGCATCTGC CGGCAGCCAT AGTCTCATGC TCAGGCTGGC GGGATATAAC ACCTGGAAAT CCGGTGTAAC AATTTCTGCA GGTCAGCAGA ACCAGATTTC AGCCAGCCTT GAACCACAGG GACCGCAGTT AGGGGCAATC CAGGTTGCAA GCATGCCCGG ATCCTCACAG ATTTTCCTGA ATGACAATTA TGAAGGGAAG ACGCCCGATA TCGGATACCT GGATATCCCC ATGCTCAATC CGGGTATATA TGCAATCAGG ATTAGCCATC CCCAGAACCA GGATTACCAG GGAACGGTTG CTGTTAATGC AGGACAGGTG AGTACGGTCA ATGTTGCCCT GCAGGCAGCA CCTGTTCCGG CAACTGTTAA TGGGACCCTG ATGGTGCAAT CCAATCCTTC AGGGGCAGCA ATATTCCTTG ATAACCTGTT TAAAGGGGTC ACACCACTGA ACCTTCCTTC AGTACCCCCT GGTGAGCATG CCCTGACCCT TCGGATAAAT GGATATGATG ATGCTGTCAG GCAGGTCAGC ATAACTGGTG GGAATACCAC GGATGTTGTT ATTGAGATGG TACCGACTGC ACCTTTGACT CAGGAACCGA CACAGACCTC TGAGCCGACG CAGACAAAGT CACCCGCACC AATGTTTGCA CTCTGTACCG GAATCGGCCT TGCTGCAGTA GCTCTCGTAT TGTCCCGACG ATCTGATCGG TGA
|
Protein sequence | MAPLRLWILS SLLILALTGV GISEELSNQA EPTGFIPDGY EDDNPPYYPT DYPTNSPTYI PTDIPTEYPT ITIEPTPQEQ YGWVLINSVP SGAMVTFDGS YQGLSPVTVQ VSLTESRFHQ IYISMDGYQD WSTSLSELPA PGQTIPVNAI LVPMEPTITP TYTPTWTPTE TPTWTPTPTP TMIGSDYGWV YIESVPSGAE VTFDGTYQGS APALVKVYTT GTPSHQILVR MTGYYDWTSS LRENPLPDQT IPITATLVPK AQYGSIRVTS HPTKSIAILD GGNQDLTPCT FSDLMPGLHT IKVIKDGYQP FMSQVRVNAG SQSQIQAQLN QIIQTGTLYV SSTPSGADIQ LDGIYYGQTP YTLSASAGSH SLMLRLAGYN TWKSGVTISA GQQNQISASL EPQGPQLGAI QVASMPGSSQ IFLNDNYEGK TPDIGYLDIP MLNPGIYAIR ISHPQNQDYQ GTVAVNAGQV STVNVALQAA PVPATVNGTL MVQSNPSGAA IFLDNLFKGV TPLNLPSVPP GEHALTLRIN GYDDAVRQVS ITGGNTTDVV IEMVPTAPLT QEPTQTSEPT QTKSPAPMFA LCTGIGLAAV ALVLSRRSDR
|
| |