Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mhun_2950 |
Symbol | |
ID | 3922579 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanospirillum hungatei JF-1 |
Kingdom | Archaea |
Replicon accession | NC_007796 |
Strand | - |
Start bp | 3226884 |
End bp | 3228203 |
Gene Length | 1320 bp |
Protein Length | 439 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 637898563 |
Product | PKD |
Protein accession | YP_504360 |
Protein GI | 88604182 |
COG category | [R] General function prediction only |
COG ID | [COG3291] FOG: PKD repeat |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.735619 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACATACA AAACCGTACG TGATACACCA TATCTCATAC TGCTTATTCT GGGCATATTC CTTCTTTGTC CATGCATTGC GGCTGGTTCA GAGATCATCT CACCGGTCGT ATTTGAATCC GGATATCACA ATATGACTGA AGATAGGAGT GGAGTATCGG CAAATGAGAC AATTCAGGCT GATTCACTCA CGCCGCCGGT CGCCTTATTC TCATTAAGTC AGTCAACCGG CCCGGTTCCT CTGACCGTTC AGTTTACCGA TCATTCCACC GGAAACCCGA CACTCTGGGG ATGGTACTTC GGTGATGGCG GAACCTCCAA TGAACAGAAC CCTGAACATA CCTATTCTGC ACCGGGGGTG TATCCGGTCG GTTTCCTCGT CTCCAACAGT GCCGGATATA ATAAGACATT TGTTCCCGGG CTGATACAGG CACAAAACCC ACTTCCAACT CCTGCTCCGG TCCCGACACC GGGCACCTAT CCGCCGGCTG CATCATTCAT AGGATCACCA ACTACCGGAT CGGTCCCACT CACGGTTCTC TTCATCGATA CCTCTGCAGA CAAACCTACA TCATGGGCAT GGTACTTCGG TGATGGCAGT TATTCACCCC GGCAGCATCC CTATCATACC TACACCCGTC CGGGGATATA TCCGGTATCA CTCACCGCTT CGAATGCAGG AGGATCTGAT ACCTTCATCG CAGAGAGTTA TATCGTTGCA TCCACCCCGG TCCCGACCCC GACACCACGA CCAACGATTA GGCCGCCTTG TCCTCTCGTC CTCTCTCAGT CAGCAGCAGT GACTGATCCG GCCTTACCGG TTGCGAAGTT CAGTGCAGAG ATCATTGACG CATCTGATAT CACCATTATA CAGTTTCTTG ATGAATCTCT CGGAGATCCT ACCTTCCGTC TCTGGTACTT CGATGATGGC AGCTATTCAA CTGATATGAA TCCGGTCTAT ACCTATACGA GGCCGGGAAC ATACCAGGTA TCCCTGATGG TCGTCAATGA TGCCGGTTCC AGTTCGGTTT CAGGAAAGGT TGAGGTAGGG AATAAGATCG GTACAGGGGG TACCGGAAAT CTGACTCGAA CTCCCTTTTT GAAAACCACT CCTCTCTCAC CAGAGTTTGC AGAGATAGTT GCACAGGATC CAAAATCCTG GGCCTGGTTC TTTGAAGAAT GGAATACATC AGCAGGGAAT GTCCCTCACA TAAATCTGAC TCCCGGTGGG GTATCTCAAT CTGGGGATTT CGGGAAACAT GCAGAAGAGA GTATGGCTCT CAAAGAGGGG ATAATCAAGG CTGGCTTTGG TGGATTGTAA
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Protein sequence | MTYKTVRDTP YLILLILGIF LLCPCIAAGS EIISPVVFES GYHNMTEDRS GVSANETIQA DSLTPPVALF SLSQSTGPVP LTVQFTDHST GNPTLWGWYF GDGGTSNEQN PEHTYSAPGV YPVGFLVSNS AGYNKTFVPG LIQAQNPLPT PAPVPTPGTY PPAASFIGSP TTGSVPLTVL FIDTSADKPT SWAWYFGDGS YSPRQHPYHT YTRPGIYPVS LTASNAGGSD TFIAESYIVA STPVPTPTPR PTIRPPCPLV LSQSAAVTDP ALPVAKFSAE IIDASDITII QFLDESLGDP TFRLWYFDDG SYSTDMNPVY TYTRPGTYQV SLMVVNDAGS SSVSGKVEVG NKIGTGGTGN LTRTPFLKTT PLSPEFAEIV AQDPKSWAWF FEEWNTSAGN VPHINLTPGG VSQSGDFGKH AEESMALKEG IIKAGFGGL
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