| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mhun_2942 |
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| Symbol | |
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| ID | 3922571 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanospirillum hungatei JF-1 |
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| Kingdom | Archaea |
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| Replicon accession | NC_007796 |
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| Strand | - |
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| Start bp | 3215938 |
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| End bp | 3217230 |
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| Gene Length | 1293 bp |
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| Protein Length | 430 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 637898556 |
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| Product | diaminopimelate decarboxylase |
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| Protein accession | YP_504353 |
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| Protein GI | 88604175 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0019] Diaminopimelate decarboxylase |
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| TIGRFAM ID | [TIGR01048] diaminopimelate decarboxylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.000269013 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.385916 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | GTGAATCTTC CCCCTCATCT TTCCATCAAA AATCAGCACC TGATGATCGA TGGGTGTGAC
ACGGTTGAAC TGGCATTCAA GTACGGAACT CCCCTGTATG TCACCGATGA AACAAGGATT
CGGGATAACT ACCGGGGATA TGTATCTGCC CTGTCAGATC ATTACCCGCA TATCCGGGTG
CTCTATGCTG CAAAGGCAAA TGGAAACCTC AATATTATAA AGATCCTAGC CCAGGAGGGT
GCAGGAGCAG ACGTCTTCTC ATCCGGAGAA CTGCACATGG CCCTTCTTGC CGGGATGAAA
CCGGAACACC TGCTCTTTAA CGGTTCATCC AAGACCGAGG CAGATCACCG GCTGGCAGTC
GAGAAGGGTG TCCGGGTATC CCTTGACTCA CTGGATGAGC TGGCCCAGCT TGACCGGATC
GCAGGTGAAG CAGGAAAGGT TGTTGAGGTA TCCTTCAGGG TAAATCCGGC AATAGATGTC
CCGACACACC CGAAGATAGC AACCGGCCTT GCAACATCGA AATTCGGCAT TCCGGCAGCA
GAGATTACCG ATGCGTATGC AGCAGCCCTT GCCTGTAAGA ACGTTGTCCC GGTCGGTATC
CACTGTCATA TCGGCTCACA GATCCTTGAC GTTGAACCCT TTGCAAAGGA GGCACAGGTC
ATGATGGAGG TTGTCGAGGA ACTCCACCGG ATGGGTGTGA GGTTTAAATT CGTGGACCTT
GGCGGTGGCC TTGGGGTTGC GTATGATCAT TTCGGCCCTG ATGCACCAAC CTTTGCCAGC
TATGCCAATG CCGTTATGCC GGTCTGCACG TCAGTCCTTA GACGGCTCGG TATTCAGCCT
GAGATCTGGA TTGAACCAGG CCGGTCCATG GTCTGTGACT CAACCGTTCT TCTAACAAAA
GTGAACTCGG TTAAGAAGGC ACACAAGACC TTTGTGAACG TGGATGCAGG GTTTAATCTT
CTCATCCGTC CGGCCATGTA TGACTCCTAC CATGAGGTGC TCGTGGCAAA CCGTGCTGAT
GAAGAGCCGG CAGGGACCTA CACGGTCACC GGGCCTATCT GTGAGACCGG AGATATCCTT
GCTCATGATC GGAAGCTTCC CGGTGTCGTT GCAGGTGACC TTATCGCCGT CCTTGACGCC
GGAGCCTATG GGTACTCGAT GGCATCCCAG TATAATGGGA GGGGCCGGTG TGCAGAGGTG
CTGGTCAGGA AGGGACAGGC AGAACTGATG CGAAGGGCAG AGACCATTGA TGATCTGATG
GCAAACCTCG AGACCCCTTC ATGGCTCAGA TAA
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| Protein sequence | MNLPPHLSIK NQHLMIDGCD TVELAFKYGT PLYVTDETRI RDNYRGYVSA LSDHYPHIRV
LYAAKANGNL NIIKILAQEG AGADVFSSGE LHMALLAGMK PEHLLFNGSS KTEADHRLAV
EKGVRVSLDS LDELAQLDRI AGEAGKVVEV SFRVNPAIDV PTHPKIATGL ATSKFGIPAA
EITDAYAAAL ACKNVVPVGI HCHIGSQILD VEPFAKEAQV MMEVVEELHR MGVRFKFVDL
GGGLGVAYDH FGPDAPTFAS YANAVMPVCT SVLRRLGIQP EIWIEPGRSM VCDSTVLLTK
VNSVKKAHKT FVNVDAGFNL LIRPAMYDSY HEVLVANRAD EEPAGTYTVT GPICETGDIL
AHDRKLPGVV AGDLIAVLDA GAYGYSMASQ YNGRGRCAEV LVRKGQAELM RRAETIDDLM
ANLETPSWLR
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