| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mhun_2892 |
|---|
| Symbol | rps2P |
|---|
| ID | 3924452 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanospirillum hungatei JF-1 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_007796 |
|---|
| Strand | - |
|---|
| Start bp | 3174636 |
|---|
| End bp | 3175244 |
|---|
| Gene Length | 609 bp |
|---|
| Protein Length | 202 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 637898504 |
|---|
| Product | 30S ribosomal protein S2 |
|---|
| Protein accession | YP_504303 |
|---|
| Protein GI | 88604125 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0052] Ribosomal protein S2 |
|---|
| TIGRFAM ID | [TIGR01012] ribosomal protein Sa(cytosolic)/S2(archaeal) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.00129354 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACGGAA ATGAAATGGA GATTGAACTG AACGAACCTC TTGTTTCAGT TGAAGAGTAT
CTTGCAGCAG GTGTCCACAT CGGAACCCAG CAGAAGAGCA GCGACATGAA GAACTTCATC
TACCGCGTCC GCGGAGATGG ATTATACATT CTGGATATCC GGGAGACCGA CGAGCGGATT
AAACTTGCCG CGAAGTTCCT TTCCCAGTAT GATCCGGCAA AAATTCTGGT TGTCACCTCA
CGTCAGTACG GCCAGTACCC GGCACGCCGG TTTGCAGATT CCATAGGTGC AACCCCGATC
ATCGGCAGAT ATATTCCTGG AACTCTGACA AACCCGCTGC TTCCACGCTA TGCAGAACCT
GATGTTGTCG TCGTAACTGA CCCGGTCAGT GACCTGCAGG TTATCAGGGA AGCCATTCAG
GTCAGCATTC CTGTAGTGGC CCTTTGTGAT ACCAACAATA TGACAAGTCT TGTGGATGTC
GTCGTCCCGA CCAATAACAA GGGGCGCAAA GCACTCTCCA TGATTTACTT CCTCCTGACC
AAGGAGTTCC TCCGTCATAA GGGATACAAC ACCTCCCTGA CCCCTGAAGA CTTCGAAACC
GAGATGTGA
|
|---|
| Protein sequence | MNGNEMEIEL NEPLVSVEEY LAAGVHIGTQ QKSSDMKNFI YRVRGDGLYI LDIRETDERI
KLAAKFLSQY DPAKILVVTS RQYGQYPARR FADSIGATPI IGRYIPGTLT NPLLPRYAEP
DVVVVTDPVS DLQVIREAIQ VSIPVVALCD TNNMTSLVDV VVPTNNKGRK ALSMIYFLLT
KEFLRHKGYN TSLTPEDFET EM
|
|---|
| |