| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mhun_2834 |
|---|
| Symbol | |
|---|
| ID | 3923103 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanospirillum hungatei JF-1 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_007796 |
|---|
| Strand | + |
|---|
| Start bp | 3111000 |
|---|
| End bp | 3111509 |
|---|
| Gene Length | 510 bp |
|---|
| Protein Length | 169 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 637898444 |
|---|
| Product | NUDIX hydrolase |
|---|
| Protein accession | YP_504245 |
|---|
| Protein GI | 88604067 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 5 |
|---|
| Fosmid unclonability p-value | 0.0461367 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAGATAT ATCGCGGACG CAGGCTCTGG GTTGAAAAGC GGGGCTTTCA TCTCCCGGAT
GGGCGGGAGA AGGAGGCGAT TGTCGTCCAT CCCGGTGATG CAGTCGTCAT ACTCCCCCAT
GAAGGAGATG ATATTTTACT TATCAGGCAA TGGAGATCTC CCATTGGCAC CTATATTTTT
GAAGCGCCTG CCGGAACCAT GGAAGAAGGT GAAGATCCGA TGGAGACTGC AAAACGGGAA
CTCATCGAAG AGACCGGTAT GGCTGCAGGG TCCATGCATG CCTTAGGATA TATCTATACA
ACACCAGGCT TTACCGATGA GCGGCTCTGG CTCTTTGAGG CAACAGATCT GGTCCCTTCA
AGGGAACATT CCCCTGATGA TGATGAAGTC ATTGAGCCGG TACGGGTTAC TGTACCGCAG
ATAAGGGAGA TGATCCGAAC CGGCGAAATC GTGGATGCAA AGACCATTTG CATCTTTTAC
CGGTGGATAT GCGAGCGTTC TGATGAATAA
|
|---|
| Protein sequence | MEIYRGRRLW VEKRGFHLPD GREKEAIVVH PGDAVVILPH EGDDILLIRQ WRSPIGTYIF
EAPAGTMEEG EDPMETAKRE LIEETGMAAG SMHALGYIYT TPGFTDERLW LFEATDLVPS
REHSPDDDEV IEPVRVTVPQ IREMIRTGEI VDAKTICIFY RWICERSDE
|
|---|
| |