| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mhun_2809 |
|---|
| Symbol | |
|---|
| ID | 3923022 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanospirillum hungatei JF-1 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_007796 |
|---|
| Strand | - |
|---|
| Start bp | 3082531 |
|---|
| End bp | 3083082 |
|---|
| Gene Length | 552 bp |
|---|
| Protein Length | 183 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 637898420 |
|---|
| Product | 2',5' RNA ligase |
|---|
| Protein accession | YP_504222 |
|---|
| Protein GI | 88604044 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG1514] 2'-5' RNA ligase |
|---|
| TIGRFAM ID | [TIGR02258] 2'-5' RNA ligase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 7 |
|---|
| Fosmid unclonability p-value | 0.222732 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGTCCGTT TATTCGTTGC AATCGACCTT CCTGATGAAA TCAGGGAACA GTTCAGGGAT
GTTCAGGATG GCCTGCGGTC AAGCCGTGCA CGTCTGACTC TGGTGGATCA GGAGTCGATG
CATATCACGT TAAAGTTTAT CGGTGAAGTG AGCGGGTCAG CCCTCTCGCA GATTACTGAA
ATATTACAAA CCATAGAGGC TTCACCTTTC TCCATGGAGG TGGGGCTTAT CGGGACGAAT
AGTCAGCGGG CTCCCCGGGT GGTCTGGGCA GAAGTGGATG ACCCTGGACA ATGCCGGGCA
CTTGCAGAAT CAATAGACTC TTCCCTGGCC TCACTCGGAT TTGAACCGGA GAAGCGGAAG
TTCAGACCCC ATATCACCAT CGCACGGGTA AGGCAATTTC ATCAGTCACT CTTTGAAGCC
CTGGCAGGCG TAGCATCCTC ATGCTCGGGA ACCATTCCGG TCAGGGAGTT TATATTGAAA
AAGAGTGAAC TCACCCCTGA CGGACCCATA TATACTGATA TTCTCCATGT CTCTCTCCGG
GAGCGTTCAT GA
|
|---|
| Protein sequence | MVRLFVAIDL PDEIREQFRD VQDGLRSSRA RLTLVDQESM HITLKFIGEV SGSALSQITE
ILQTIEASPF SMEVGLIGTN SQRAPRVVWA EVDDPGQCRA LAESIDSSLA SLGFEPEKRK
FRPHITIARV RQFHQSLFEA LAGVASSCSG TIPVREFILK KSELTPDGPI YTDILHVSLR
ERS
|
|---|
| |