Gene Mhun_2807 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMhun_2807 
Symbol 
ID3923020 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanospirillum hungatei JF-1 
KingdomArchaea 
Replicon accessionNC_007796 
Strand
Start bp3079376 
End bp3081106 
Gene Length1731 bp 
Protein Length576 aa 
Translation table11 
GC content49% 
IMG OID637898418 
Producttetratricopeptide TPR_2 
Protein accessionYP_504220 
Protein GI88604042 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG3063] Tfp pilus assembly protein PilF 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.233123 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCATTC CACGTCAGGT TCATGGTTTC ATCATACTGG TGGTATTGCT TTTTACCGTG 
CCAGCTCTTG CCACACAGTC TGATGACCTG ATATCAGACG GGAATGTCTT ATACAGCCAG
GGAATGTACC AGGAAGCTAT CTCCTATTTT GAGCGTGCTA TTGAACAGGA TCCTTCGAAT
GCAGCGGCAT GGTACAATAA AGGGGTTTCA CTTTATAAAC TAGGTCAGGT GGATGAAGCA
ATCGCCTCAT ATGAGGTCGC CATCGGGCTT GATCCCCGGA ACTCTGATTA CTGGTACAAT
AAGGGAAATG CCCTCTTAAG TAAGAACCTG CTCAATGAGG CATATGCGGC ATATGATGTG
GCAATTCAGC TTGACCCCTA TGATGTACAG GCCTGGATGG CAAAGGGAAA TGTTCTGTCT
GACCAGAAGC AGTACGAAGA TGCCATCAGG GCATATGATG CTGCTATCCA GATAGACCCG
GATAATGAGG AGACCTGGTT TGCAAAGGGG AATGCTCATT ACAACCAGGA AAATTTTAAA
GAAGCGGTGT CCGCCTATGA GATCGCTTTA CAAAAGGACA GTAAGGACAG TAAGGCCTGG
TACAACAAGG GAAATGCCCA GTATAATCTT GGAAACCTTG AGGATGCCCT GAAAAGTTAT
GAGATGGCCC TTGCCTATAA CCCGAAAGAT GCCATTGCAT ATACGAACAA AGGAATGGCT
CTTGCAGATC TTGAGCGGTA CGACGATGCA ATTGATGCCT ATGAGGCTGC TCTCAGCCTT
GACGCAACCG ACCTGAAAGC CTGGACCTCT CTTGGACAGG TGTATACGAA ACTGCGAGAG
TATGATAATG CTGTCCGGGC ATTTCAGATG GCTCTAAAGC TCAACAAGAC TGACTCATCG
GTCTGGAAGA ATATCGGCGA TGTCCTCATG CTGGAAAAGC GGTACGATGA GGCACTTGCT
GCATATGAAC AGGCCATCGC ATTAAACCGG ATGGATTCAT CAGCCTGGAT TGGGAAGGGA
ACTGCTCTGA ATAACCTTGC CAGATACAAA GAAGCTCTGG GCGTATTCGA GATAGCCTGC
TCCATGTCTC CCCTGTTTGC TTCAGGATGG GTAGGAAAAG GGAACAGTCT TTCCGGACTT
GGGCAGATAC AGGAGGCTGA TGGTGCGTAT GAAGCAGCGC TTCAGCTTGA CCCGAGGAAC
AGTCAGGCAC TTGCCGGAAA GAGTAAGAAT CTGGTGACAA CCGGCGATCC GGAGACTGCA
CTCCAATCCC TGCAGCTAGC CATTGCCGCT GATCCGACAA ATATGGCCCT GCTTGGCCGG
CTTGCCGAGA TATATGAAAA AATGGGGCGG TATCAGGATG CTCTTGATGT CTGGAATTCA
GTCTCCCTGA ATGAATCTGA TCCTAACCTT GTCAGAAAAG GAAAAGCGAT GACTCTGGTC
CGGGCAGGCA GGGAGGCTGA AGCGCTGGCT TTATATCGGG ACGTTCTTGG ATCCGATCAG
CAGTCAGGGT TTGTGTATGA GCAGTATGGG GATGTGCTGG CACTTGCCGG AGATACCCCT
GGAGCGGAGC ATGCCTACCG AAAAGCGATG GAGATACAGC CAAACCTGAC CGGGATCCTT
CTGAAGATTA ATGCACTTGA ATCCACTCAT AAAGAGACTC CGCTCACAAT CTTCCCAATA
CTACTCGGAC TTATCACCGG ATGTCTGCTC CTGGTCAGAA GAGAGCGGTG A
 
Protein sequence
MTIPRQVHGF IILVVLLFTV PALATQSDDL ISDGNVLYSQ GMYQEAISYF ERAIEQDPSN 
AAAWYNKGVS LYKLGQVDEA IASYEVAIGL DPRNSDYWYN KGNALLSKNL LNEAYAAYDV
AIQLDPYDVQ AWMAKGNVLS DQKQYEDAIR AYDAAIQIDP DNEETWFAKG NAHYNQENFK
EAVSAYEIAL QKDSKDSKAW YNKGNAQYNL GNLEDALKSY EMALAYNPKD AIAYTNKGMA
LADLERYDDA IDAYEAALSL DATDLKAWTS LGQVYTKLRE YDNAVRAFQM ALKLNKTDSS
VWKNIGDVLM LEKRYDEALA AYEQAIALNR MDSSAWIGKG TALNNLARYK EALGVFEIAC
SMSPLFASGW VGKGNSLSGL GQIQEADGAY EAALQLDPRN SQALAGKSKN LVTTGDPETA
LQSLQLAIAA DPTNMALLGR LAEIYEKMGR YQDALDVWNS VSLNESDPNL VRKGKAMTLV
RAGREAEALA LYRDVLGSDQ QSGFVYEQYG DVLALAGDTP GAEHAYRKAM EIQPNLTGIL
LKINALESTH KETPLTIFPI LLGLITGCLL LVRRER