Gene Mhun_2797 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMhun_2797 
Symbol 
ID3923035 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanospirillum hungatei JF-1 
KingdomArchaea 
Replicon accessionNC_007796 
Strand
Start bp3069506 
End bp3070027 
Gene Length522 bp 
Protein Length173 aa 
Translation table11 
GC content43% 
IMG OID637898408 
Producttranscription factor TFIIE, alpha subunit 
Protein accessionYP_504210 
Protein GI88604032 
COG category[K] Transcription 
COG ID[COG1675] Transcription initiation factor IIE, alpha subunit 
TIGRFAM ID[TIGR00373] conserved hypothetical protein TIGR00373 


Plasmid Coverage information

Num covering plasmid clones41 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0975699 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTTCCC ACGAGGAGAT ACTGGCTGAC AAGGCTATTT TTGCATACCT TCACCGAATG 
ATTGGGGATG AGGGAATTGA ACTCATCCGA CGGTTTCCGA CAGATAAGGA ATATAGTGAT
GAAGAACTTG CAGAGGTCAC AAAGATAAAC CTGAACTCAG TCCGGAATAC CTTGTACACT
CTGTATGAAC ACCGGCTGGC AAAATATCGC AGAATAAAAA ATAATGAGAC CGGCTGGCTG
ACCTATCTCT GGGAACTTGA ACTGGACAAT ATGTATGATT CAGTCTCAAA GGATCTTGAG
ATAATTCTGG AAAAACTTCG TAAGCGGTAC AAATACGAGA GTGAGAACGC ATTCTATAAC
TGTCCGAACT GCGGAAACAC CATCACATTT TCGGATGCAA TGGATTCACA GTTTGTCTGT
CAGGAATGTG AAAACAAGAT GGTTCATTTT GACAATGACC TGCTGGTGAA TGCTCTGCAG
AAACGTATTG CACGTATTGA AGAGAATCTC GGTCATGTGT AG
 
Protein sequence
MASHEEILAD KAIFAYLHRM IGDEGIELIR RFPTDKEYSD EELAEVTKIN LNSVRNTLYT 
LYEHRLAKYR RIKNNETGWL TYLWELELDN MYDSVSKDLE IILEKLRKRY KYESENAFYN
CPNCGNTITF SDAMDSQFVC QECENKMVHF DNDLLVNALQ KRIARIEENL GHV