| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mhun_2781 |
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| Symbol | |
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| ID | 3922518 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanospirillum hungatei JF-1 |
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| Kingdom | Archaea |
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| Replicon accession | NC_007796 |
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| Strand | - |
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| Start bp | 3050056 |
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| End bp | 3053184 |
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| Gene Length | 3129 bp |
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| Protein Length | 1042 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 637898392 |
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| Product | HsdR family type I site-specific deoxyribonuclease |
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| Protein accession | YP_504195 |
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| Protein GI | 88604017 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0610] Type I site-specific restriction-modification system, R (restriction) subunit and related helicases |
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| TIGRFAM ID | [TIGR00348] type I site-specific deoxyribonuclease, HsdR family |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.759966 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAACAA CGGGATTATG TGAATCTGAC GTAGAAGAAA CAGCACTTGA TATCTTTCGT
GACCTTGGGT ACGAGGTCCT CTATGGGTAT GAGGTCGCAC CCGGAGAACG GGATCAGATC
CGAAACTCGT TTGAAGAATA CCTCCTTGGG TCCAGACTCG AAGACGCCAT CTTCCGGCTC
AACAAAACGC TCCCCTGTGA TGCCCATGAA GCAGCACAGA AGATCCTCAC CAATCCCGGT
CATACCACCC TCATACAGAA TAATAAGACC GTTCATGAGA TGCTCTCCGG TGGAATCACG
GTTGAATACC GGCGGAAGGA TGGATCCGTT GGTGGAGATC AGGTCAGGCT TATTGACTTT
GAACACCCGG AGAACAACGA GTTCCTTGTC GTCAATCAGT TCACCATTCA GGAAGGGAAA
AACCACCGAA GGCCTGATAT CGTCCTCTTC ATCAACGGAA TCCCGGTCAT CATCTTTGAA
CTCAAAAACC CCACCGATGA ACGGGCCACC CTGACCATTG CCCATAACCA GCTCCAGACG
TATATGCAGG AGATCCCCTC ATTCTTCTCA TACAATACCA TGGCGATCAT CTCAGACGGA
ATCCAGACAC GGATTGGAAC CCTCTCCGCA TCACTTGAAC GGTTCTCCCG GTGGAGGACG
ATTGACGGAG CACAGGAAGC CCCGAATCAT ATCCCTGAGA TCGAAGTGCT CATCCGGGGT
GTCTGTAACA AAAAGCGGCT TCTTGACCTG ATCCGGTTCT TTATCGTATT TGAAGAGGAT
GAACGGGGAA ACACCATCAA GAAACTGGCC GGATACCACC AGTATCATGC CGTAAACCTG
GCGGTCAGGT CTACCGAGAC AGCTATCAGT GACGTCGGAG ACCGCCGGTG CGGAGTCGTC
TGGCATACCC AGGGGTCAGG AAAAAGTCTC ACCATGGTCT TTTACTCAGG AAAGATCATC
CAGACTCCAT CACTCCAGAA CCCGACGATC CTGGTCATCA CCGACCGGAA TGATCTTGAC
GATCAACTCT TCGGAACCTT CTCCCGGTGC AGAAAACTCC TCCGCCAGAC GCCCATCCAG
GCAGAGGGCC GGGACCATCT GAAGACACTG CTCAGTGTCG CATCTGGTGG TGTCGTCTTC
ACTACCATTC AGAAGTTCTT CCCCGAAGAT GAGAACAAGG AGACCTATCC CCTCCTCTCT
GACCGGAAGA ACATCATTGT CATCGCAGAT GAGGCACACC GGAGCCAGTA CGGGATGCAT
GGAAAAGTAA GCAAGAAAGG AGAGATAAGT TACGGATTTG CCAAGTACAT CCGTGATGCT
CTCCCAAACG CCTCATTTAT CGGATTTACC GGGACACCCA TCGACCTTCA GGATAAAGTC
ACCAGAAACG TCTTTGGTGA ATACATCAGC GTCTATGATA TCCAGCAGGC CATCAAGGAC
AAGGCAACCG TTCCTATCTA TTACGAAAGC CGTATCGTCG ATATCAGGAT GAATGAGCAG
ATAAAACCGC TCATTGACCA GGAGTTTGAA GAAGTCACTG AGAACGAAGA AGTCATCAGA
AAAGAGAAAC TCCGGACAAA ATGGGCTGCC CTTGAGGCCA TCGTCGGAGA TGAGAAACGA
ATCAATGAGG TTGCTGATGA TCTCATCCGC CACTTTAAGC AGCGGTCAGA TGCCATCGAA
GGGAAAGCGA TGATCGTCTG CATGAGCAGG CGGATCTGTG TGGAGCTCTA CAAAGCACTG
GTTGAGAGGC AACCTGATTG GGATTCTCAT TCAGACAATG AGGGGTTCCT GAAGGTGATC
ATGACCGGTT CAGCAGGCGA TGAGAAAGAT TTCCAGAAAC ACATCAGACC CAAATCAGGC
CGGGAACTCC TTGCAAAACG GTTTAAAGAT CCGGAAGATC CATTCAAAAT CGCAATTGTC
CGTGATATGT GGCTGACCGG ATTTGATGTT CCCTGTCTGC ATACTATGTA TATCGACAAG
CCCATGAAGG GCCATACTCT TATGCAGGCA ATCGCCAGGG TAAACCGGGT ATGGAGAGAT
AAGCCTGGTG GACTTATTGT TGATTACATC GGTCTTGCCG AAGAACTGAA AAAAGCCCTG
GTCACCTACA CGGAGAGTAA AGGCAAAGGG GATCCCGTAT TTGACCAGGA GAGGATAGTC
GATAAGATGA TGGAGAAGTA CGAGGTCTGT TGTCATCTCT TCCATGGATT TGACTGGTCA
GGCTGGCGGG GAGCTCCGGC AGCGACTCGT CTTTCCATCC TTCAGGCAGG ATTCAACTAT
GTCCTTGATG ATCCTGAACG GAAATCAGAC TTTATGCAGC ACGTGCTTGA ACTCTCCCAG
GCTTTTGCCC TTGCTCTCCC CCATGAAAAA GCCATTGAGA TCCGGGAAGA TGTCGCGTAT
TTCCAGGCCG TTCGGGCACA AATCATAAAG ACATCAGAAG GAGCAGGAAA ATCAGAGTAC
GAACTGAATC TGGCGGTAAA GCAGATAGTT TCAAAATCCA TTGTCCCCCT TGGTATTGTC
GATATCTTCA AGGAGATGGG AAAGGATGTC GGAGATATCT CAGTCCTCTC CGAAGAGTTC
CTCAATGACC TCCTGAAATA CAAAAATCAG AATGTGGCAA TTGCTGCCAT GACCCGGCTG
CTGAATGATC AGATCCGGGC ACGAACCCGG AAAAACACAA CCGAAGCAAG AAAATTCTCC
GAGATGCTTG AGCAGACGAT AAACAAGTAC AATAACCGGA AGGTCACGAC CCAGGAGATC
TTAAAAGAAC TTGCGCAGAT TGCACGGGAG ATCAGGGAGG CTCAGCAGAG AGGAGAGGAT
CTGGGACTTA CCGAGGCAGA ACTTGCATTT TACGATGCAC TCGGTGTGAA TGACAGTGCG
GTGGTGATTC TCGGTGATGA CATACTCAAA AAGATAGCCC AGGACCTGGT AAAGACCATC
AGGGAGAATG TTACGATCGA CTGGTCATCA CGTGAATCGG TTCGGGCAAA GATGCGGGTT
GCGATAAAGA GAATCCTCCG GGTGAACGGG TATCCTCCGG ACAAACAGGA GAATGCTATT
CAGACGGTGA TGCAACCTAT ATTCGTCAGA TCTATTAAAA TTTTATATAA TAGTAAACTA
TATAACTAA
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| Protein sequence | MATTGLCESD VEETALDIFR DLGYEVLYGY EVAPGERDQI RNSFEEYLLG SRLEDAIFRL
NKTLPCDAHE AAQKILTNPG HTTLIQNNKT VHEMLSGGIT VEYRRKDGSV GGDQVRLIDF
EHPENNEFLV VNQFTIQEGK NHRRPDIVLF INGIPVIIFE LKNPTDERAT LTIAHNQLQT
YMQEIPSFFS YNTMAIISDG IQTRIGTLSA SLERFSRWRT IDGAQEAPNH IPEIEVLIRG
VCNKKRLLDL IRFFIVFEED ERGNTIKKLA GYHQYHAVNL AVRSTETAIS DVGDRRCGVV
WHTQGSGKSL TMVFYSGKII QTPSLQNPTI LVITDRNDLD DQLFGTFSRC RKLLRQTPIQ
AEGRDHLKTL LSVASGGVVF TTIQKFFPED ENKETYPLLS DRKNIIVIAD EAHRSQYGMH
GKVSKKGEIS YGFAKYIRDA LPNASFIGFT GTPIDLQDKV TRNVFGEYIS VYDIQQAIKD
KATVPIYYES RIVDIRMNEQ IKPLIDQEFE EVTENEEVIR KEKLRTKWAA LEAIVGDEKR
INEVADDLIR HFKQRSDAIE GKAMIVCMSR RICVELYKAL VERQPDWDSH SDNEGFLKVI
MTGSAGDEKD FQKHIRPKSG RELLAKRFKD PEDPFKIAIV RDMWLTGFDV PCLHTMYIDK
PMKGHTLMQA IARVNRVWRD KPGGLIVDYI GLAEELKKAL VTYTESKGKG DPVFDQERIV
DKMMEKYEVC CHLFHGFDWS GWRGAPAATR LSILQAGFNY VLDDPERKSD FMQHVLELSQ
AFALALPHEK AIEIREDVAY FQAVRAQIIK TSEGAGKSEY ELNLAVKQIV SKSIVPLGIV
DIFKEMGKDV GDISVLSEEF LNDLLKYKNQ NVAIAAMTRL LNDQIRARTR KNTTEARKFS
EMLEQTINKY NNRKVTTQEI LKELAQIARE IREAQQRGED LGLTEAELAF YDALGVNDSA
VVILGDDILK KIAQDLVKTI RENVTIDWSS RESVRAKMRV AIKRILRVNG YPPDKQENAI
QTVMQPIFVR SIKILYNSKL YN
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