| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mhun_2689 |
|---|
| Symbol | |
|---|
| ID | 3924584 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanospirillum hungatei JF-1 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_007796 |
|---|
| Strand | + |
|---|
| Start bp | 2962024 |
|---|
| End bp | 2963964 |
|---|
| Gene Length | 1941 bp |
|---|
| Protein Length | 646 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 637898300 |
|---|
| Product | multi-sensor signal transduction histidine kinase |
|---|
| Protein accession | YP_504103 |
|---|
| Protein GI | 88603925 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG0642] Signal transduction histidine kinase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 6 |
|---|
| Fosmid unclonability p-value | 0.119288 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAACTCC GGACACGGGT TCTTTTGTTA TATTTATGCA TAATTACCCT TGTACTCGTC
TGTCTGGGAG TTATCATGCC CTCATCAATT CATGAAAAAA ACCTGCAGAC AATTCATGCC
GATACAGAGA ACCAATTACA ACATATTGAC TTTGCACTCT CCAATTTTAT TCAGGAGGTT
GAGCAGGATA TTTCCGAACT GCTGCTGCAT GATATCATAA CAGACCCGGA TGATACCGGG
TTTACAAATT TTCTGAATGC ATCAGAAGAT ACCTTCGTCT ATTCTATCGG CCCTCGGGAG
GCCAAAATTA TCAATGATCT GAATGCATTC AGGCTCACCC ACCCGTCGGT TAATTCGGTA
TACATGGGTC GGGAGACTGG CACTTTTGTC AGATCCCACC CCCGGCCCAG GCCGACCCGG
TACGACCCCA GAGACCGGCC CTGGTACATC CTTGGAAAAG AGAACCCGGA TAAAATCATG
ATGACCGAGC CCTATATGTC GGTCACATCG CCGGATATCA ACATCGGCAT AGTCAAGGCT
CTGACCTATC CGAACGGGAC TGTGTATGGT GTCCTTGGAG CGGACATCAC CCTTACCAAC
CTGACCAGGT ATATCTCTTC CTTTGATATC GGGAGATCCG GAGAGATAAT GCTGGTAAAC
GAGAGTGGAA TCATCCTTGC ATCACGAAAT GAAAGCGCAC TATTTACCAA TATCCGTGAA
AGTCTTGGGG AAGCCCAGAC AGAGTATCTG CTCAGCACGA GCAGAGGAAT TCTCACCCTC
CCATCTGCAT ACCTCATCTT TTATACCTCA CCCATGCTGG GCTGGAAATT ACTGATCACC
ATCCCGTACC ATGAGATTGA AAAAGAGATA ATGGCCTCAA TGATGTACAT GCTCCTCTTT
GTCTTCCTTG CCCTTATCCT TCTCAGCATC ACCACCCTTA TCATCCTTGA CAAGACCATA
ATCCGCCCTC TTTCCTACCT GACCGATATT ACGAAGAATA TCACCGAGAC CGGGAACCTG
AACCAGAAGA TAGAACTTCA TACCAAAGGT GAAGTCCAGG AACTTGCAAA ATCCTTTGAA
CGGATGATAG GCAAAATAAA GGAGGAAGAA GAGCAGAAAA ACAAGGCATT CAACGAGTTA
TCATCATACC GGGACCATCT GGAAGATCTT GTCAGAGAAA GGACACAGCA GCTTGAGGCT
GCAAATACGG ATCTCATCAC CGAACGAAAC CGGGCAGAAG AGGCAGATCA GTTAAAGTCC
GCATTTCTCG CGACCATGTC CCATGAGCTC AGAACTCCGC TCAATTCAAT CATCGGGTTT
ACAGGCATCA TCCTTCAGGG TCTGGCCGGG CCATTAAACA AGGAACAGGA GAAGCAGCTG
GGGATGGTCC AGGACAGTGC CAGACATCTG CTTGCACTTA TCAATGATGT CCTTGACATC
TCAAAGATTG AGGCAGGAGA ACTTAATATC TCACGGGAAC CGGTGAATAT TCAAAAATCA
ATAGAATCGG TCTGCACAAC CCTGAGAAAG AGTGCCGAGG ACAAAGGGCT TTCCCTCCAT
GTTGACATAT CTCCGGATAC AGGGTTTATT ATCGGAGATC AACGAAGAAT CGAGCAGATT
CTCATCAACC TTATCAATAA TGCAATAAAA TTCACCGAAC GAGGATATGT CTGCGTTAAA
AGTTCGCTCA GGGAGAAGAA CGTATGCATC TCCGTATCAG ATACCGGTAT CGGAATCAGT
GAAGAGGAGA TGAAAAAACT ATTCAGGCCG TTCCAGCAGA TCGATACCGG AACTACCCGG
AAACATGAAG GAACCGGCCT TGGATTATCC ATATGCAAAA AACTCGTGGA ATTACATGGG
GGAACCATAA TGGTTACCAG CGAACCAGGA AAGGGAAGTG AATTTACGGT TATATTACCA
GCTGGAGAAG AATTATCATG A
|
|---|
| Protein sequence | MKLRTRVLLL YLCIITLVLV CLGVIMPSSI HEKNLQTIHA DTENQLQHID FALSNFIQEV
EQDISELLLH DIITDPDDTG FTNFLNASED TFVYSIGPRE AKIINDLNAF RLTHPSVNSV
YMGRETGTFV RSHPRPRPTR YDPRDRPWYI LGKENPDKIM MTEPYMSVTS PDINIGIVKA
LTYPNGTVYG VLGADITLTN LTRYISSFDI GRSGEIMLVN ESGIILASRN ESALFTNIRE
SLGEAQTEYL LSTSRGILTL PSAYLIFYTS PMLGWKLLIT IPYHEIEKEI MASMMYMLLF
VFLALILLSI TTLIILDKTI IRPLSYLTDI TKNITETGNL NQKIELHTKG EVQELAKSFE
RMIGKIKEEE EQKNKAFNEL SSYRDHLEDL VRERTQQLEA ANTDLITERN RAEEADQLKS
AFLATMSHEL RTPLNSIIGF TGIILQGLAG PLNKEQEKQL GMVQDSARHL LALINDVLDI
SKIEAGELNI SREPVNIQKS IESVCTTLRK SAEDKGLSLH VDISPDTGFI IGDQRRIEQI
LINLINNAIK FTERGYVCVK SSLREKNVCI SVSDTGIGIS EEEMKKLFRP FQQIDTGTTR
KHEGTGLGLS ICKKLVELHG GTIMVTSEPG KGSEFTVILP AGEELS
|
|---|
| |