Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mhun_2268 |
Symbol | |
ID | 3924626 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanospirillum hungatei JF-1 |
Kingdom | Archaea |
Replicon accession | NC_007796 |
Strand | + |
Start bp | 2531886 |
End bp | 2532818 |
Gene Length | 933 bp |
Protein Length | 310 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 637897876 |
Product | pseudouridylate synthase |
Protein accession | YP_503692 |
Protein GI | 88603514 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0130] Pseudouridine synthase |
TIGRFAM ID | [TIGR00425] rRNA pseudouridine synthase, putative [TIGR00431] tRNA pseudouridine 55 synthase [TIGR00451] uncharacterized domain 2 |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.570966 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAACGAT CCTCTTCATT TCTGGCACAT ATTGCTGCAC ACCAGGGATC GATCATCCTC ATCGATAAAC CCCGTGGGCC ATCCAGCCAC CAGGTAGCAG CATGGGTCCG GGAGATTACT GGTGTATCAT CCGTTGGTCA TACCGGAACC CTTGATCCCC CGGTCTCCGG AGTACTTGTC ATTCTTCTCG GGCGGGCAGT CCGACTTACG ACCATTCTGC ATCAGGACGA TAAGGAATAT GTGGCACTGC TCAGGCTGCA GGGAGATGTA TCAGATGCAG AACTTGCTGA AGTCATTGAG CACTTCACCG GAAGGATCTA CCAGCGGCCA CCCAAGCGGA GTGCAGTAAA ACGTGCCCTT CGAATCAGGG AGATCCATGA ACTGGAGATG CTGGGAAGGG ACGGAAGACT TGTTCTCTTC AGGGTGAAAT GTGATTCAGG CACCTATATC AGATCACTGT GTCATCATAT CGGCATGGCC TGTGGGGTGG GGGGAGCGAT GGTTGAGCTC AGGCGGACCA GATCAGGTCC CTTTTCCGAG AAGGATTGTG TCACCCTTCA TACCCTCCGC GATGCAGTTG AGAAGGCACG TGCAGGCGAT GATACGTATC TTAGGAAGAT TATACGATCA CCTCTTGAAG CATTGCACGG GTTTCCAAGG ATACAGATGA AGGAATCAGC GGCTGATGCG ATCTGTCATG GTGCCAGACT CTCTTCACGA GGCGTTGTCA GCCATGATAC ATTCCAGATG GAGGATCTGG TTGTCATGTT GGCCGGAGAT GACTTTATCG GAATCGGTGA GGCTCTGGTT TCAAGTTCGC GGATTGTGCC TGGTGAAAAG GGACTGGTTG TCGCACCTCG CCTTGTCATG CAGGATATCG GAGTATACCC TGCAGTCTGG AAAGCTCATA AGCCAAAGAG AGAAAAGTCT TAA
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Protein sequence | MERSSSFLAH IAAHQGSIIL IDKPRGPSSH QVAAWVREIT GVSSVGHTGT LDPPVSGVLV ILLGRAVRLT TILHQDDKEY VALLRLQGDV SDAELAEVIE HFTGRIYQRP PKRSAVKRAL RIREIHELEM LGRDGRLVLF RVKCDSGTYI RSLCHHIGMA CGVGGAMVEL RRTRSGPFSE KDCVTLHTLR DAVEKARAGD DTYLRKIIRS PLEALHGFPR IQMKESAADA ICHGARLSSR GVVSHDTFQM EDLVVMLAGD DFIGIGEALV SSSRIVPGEK GLVVAPRLVM QDIGVYPAVW KAHKPKREKS
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