Gene Mhun_2268 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMhun_2268 
Symbol 
ID3924626 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanospirillum hungatei JF-1 
KingdomArchaea 
Replicon accessionNC_007796 
Strand
Start bp2531886 
End bp2532818 
Gene Length933 bp 
Protein Length310 aa 
Translation table11 
GC content52% 
IMG OID637897876 
Productpseudouridylate synthase 
Protein accessionYP_503692 
Protein GI88603514 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0130] Pseudouridine synthase 
TIGRFAM ID[TIGR00425] rRNA pseudouridine synthase, putative
[TIGR00431] tRNA pseudouridine 55 synthase
[TIGR00451] uncharacterized domain 2 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.570966 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAACGAT CCTCTTCATT TCTGGCACAT ATTGCTGCAC ACCAGGGATC GATCATCCTC 
ATCGATAAAC CCCGTGGGCC ATCCAGCCAC CAGGTAGCAG CATGGGTCCG GGAGATTACT
GGTGTATCAT CCGTTGGTCA TACCGGAACC CTTGATCCCC CGGTCTCCGG AGTACTTGTC
ATTCTTCTCG GGCGGGCAGT CCGACTTACG ACCATTCTGC ATCAGGACGA TAAGGAATAT
GTGGCACTGC TCAGGCTGCA GGGAGATGTA TCAGATGCAG AACTTGCTGA AGTCATTGAG
CACTTCACCG GAAGGATCTA CCAGCGGCCA CCCAAGCGGA GTGCAGTAAA ACGTGCCCTT
CGAATCAGGG AGATCCATGA ACTGGAGATG CTGGGAAGGG ACGGAAGACT TGTTCTCTTC
AGGGTGAAAT GTGATTCAGG CACCTATATC AGATCACTGT GTCATCATAT CGGCATGGCC
TGTGGGGTGG GGGGAGCGAT GGTTGAGCTC AGGCGGACCA GATCAGGTCC CTTTTCCGAG
AAGGATTGTG TCACCCTTCA TACCCTCCGC GATGCAGTTG AGAAGGCACG TGCAGGCGAT
GATACGTATC TTAGGAAGAT TATACGATCA CCTCTTGAAG CATTGCACGG GTTTCCAAGG
ATACAGATGA AGGAATCAGC GGCTGATGCG ATCTGTCATG GTGCCAGACT CTCTTCACGA
GGCGTTGTCA GCCATGATAC ATTCCAGATG GAGGATCTGG TTGTCATGTT GGCCGGAGAT
GACTTTATCG GAATCGGTGA GGCTCTGGTT TCAAGTTCGC GGATTGTGCC TGGTGAAAAG
GGACTGGTTG TCGCACCTCG CCTTGTCATG CAGGATATCG GAGTATACCC TGCAGTCTGG
AAAGCTCATA AGCCAAAGAG AGAAAAGTCT TAA
 
Protein sequence
MERSSSFLAH IAAHQGSIIL IDKPRGPSSH QVAAWVREIT GVSSVGHTGT LDPPVSGVLV 
ILLGRAVRLT TILHQDDKEY VALLRLQGDV SDAELAEVIE HFTGRIYQRP PKRSAVKRAL
RIREIHELEM LGRDGRLVLF RVKCDSGTYI RSLCHHIGMA CGVGGAMVEL RRTRSGPFSE
KDCVTLHTLR DAVEKARAGD DTYLRKIIRS PLEALHGFPR IQMKESAADA ICHGARLSSR
GVVSHDTFQM EDLVVMLAGD DFIGIGEALV SSSRIVPGEK GLVVAPRLVM QDIGVYPAVW
KAHKPKREKS