Gene Mhun_2020 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMhun_2020 
Symbol 
ID3924983 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanospirillum hungatei JF-1 
KingdomArchaea 
Replicon accessionNC_007796 
Strand
Start bp2273802 
End bp2275046 
Gene Length1245 bp 
Protein Length414 aa 
Translation table11 
GC content46% 
IMG OID637897628 
Productcoenzyme F420 hydrogenase/dehydrogenase beta subunit-like 
Protein accessionYP_503448 
Protein GI88603270 
COG category[C] Energy production and conversion 
COG ID[COG1035] Coenzyme F420-reducing hydrogenase, beta subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.641041 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAGCTA AAGGTGATAT GCTCTATGCT TGGGCAAAGG ACGCAGAAAT CCAGAAGAAA 
GGAGAGTGTG GTGGAGCAGT CACAGCACTT TTAAAACATG CCCTTGAAAC TAAAATGGTC
GATGCTGTAG TTGCCATCAA GAAGGGCAAA GATCTGTATG ATGCAGTACC GACCGTCATT
ACCAATCCTG AAGACATCAT CCAGACCGCC GGGTCATTGC ATTGTGGCAC ACTCCTTATC
CCTAAACTGA TCAAGAAATA TCTGAACGGT GCAAAGGATA TGAAGCTCGC AGTCACCTGT
AAGGGCTGTG ATGCTATGGC ATTCTATGAG CTGGCAAAGC GGAACCAGAT AAACCTTGAT
AACATCATCA TGATCGGTGT CAACTGTGGA GGTTCCGTAA GTCCTGTTAC AGCACGAAAG
ATGATTTCAA ACAAGTTTGG TGTTGACCCT GACACGGTTC ATAAGGAAGA GATTGACAAG
GGTCAGTTCA TCATAGAGTA TGAAGGTGGA CACAAGGGCA TAAAGATCGA TGAGCTTGAA
GAGGAAGGAT ATGGTCGGCG TTCCAACTGC CGACGCTGTA AGATGAAAAT CCCCCGTCAG
GCAGATATTG CAGCAGGAAA TTGGGGAGTC ATCGGAGATA AGGCAGGTAA GGCAACATTC
CTTGAGATCT GTTCAGAGAA GGGTGCAAAC CTTGTAAACA GTGCTCAGTC AAAGGGTGCT
CTTGAGATCT CTCCTGCTGA TCCAAAGGGT ATTGATATCC GAGCGAAAGT CGAGAAGGCA
ATGTTCAACC TTGGTGATGA GTGGAGACAC CGTGACTTTG AGGGCATGGG TAAAGGCAAG
GACCGTCTGA AACTCATGAT GTCGGAGTCT TCAAAATGCA TCAAATGTTA TGCCTGTGTT
GAAGCATGTC CAATCTGCTA TTGTATCGAG TGTTCTACCA AGAAGCCCTG GTACATTGCT
CCCGGTGTTC TGCCAACCAG CTTCATGTTC CACCTGATAA GGTTTGCACA TGTTTCAGAC
TCCTGTATCA ATTGTGGTCA GTGTGAGGAA CTTTGTCCAA TGGAAATCCC GAATGCCCTT
TTCATGCACT CTCAACAGGT TGAGATAGAG AAGATGTTTG GCCATATCCC GGGCCAGGAT
ATGACGCCTC CAATTCATGC CTTTGTTGAG GAAAAGGCAG AACGTGCACG TCTCGATGCA
ACTGGCACCG ATTCAATATA CACCAATATC TTTACGGATG AATAA
 
Protein sequence
MAAKGDMLYA WAKDAEIQKK GECGGAVTAL LKHALETKMV DAVVAIKKGK DLYDAVPTVI 
TNPEDIIQTA GSLHCGTLLI PKLIKKYLNG AKDMKLAVTC KGCDAMAFYE LAKRNQINLD
NIIMIGVNCG GSVSPVTARK MISNKFGVDP DTVHKEEIDK GQFIIEYEGG HKGIKIDELE
EEGYGRRSNC RRCKMKIPRQ ADIAAGNWGV IGDKAGKATF LEICSEKGAN LVNSAQSKGA
LEISPADPKG IDIRAKVEKA MFNLGDEWRH RDFEGMGKGK DRLKLMMSES SKCIKCYACV
EACPICYCIE CSTKKPWYIA PGVLPTSFMF HLIRFAHVSD SCINCGQCEE LCPMEIPNAL
FMHSQQVEIE KMFGHIPGQD MTPPIHAFVE EKAERARLDA TGTDSIYTNI FTDE