Gene Mhun_1859 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMhun_1859 
Symbol 
ID3922653 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanospirillum hungatei JF-1 
KingdomArchaea 
Replicon accessionNC_007796 
Strand
Start bp2099339 
End bp2099920 
Gene Length582 bp 
Protein Length193 aa 
Translation table11 
GC content41% 
IMG OID637897475 
ProductCRISPR-associated Cas4 family protein 
Protein accessionYP_503295 
Protein GI88603117 
COG category[L] Replication, recombination and repair 
COG ID[COG1468] RecB family exonuclease 
TIGRFAM ID[TIGR00372] CRISPR-associated protein Cas4 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.343722 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.533704 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTACTTA AGACCCGGTG GATTGATGAC ATGATCAATG TGTCTGATAT CAATCAATTT 
TTATACTGCC CGAGAAGGCT TTTTTACCTA CAATTTTACC AGACACAAGG AGTTAATGAA
TTTCTTGTTG ATGGGAGGAG AAAGCATCAG AGACAGGGGA GGAGGGGCGG TTATGTATTT
GAACTCTATC TCAGTTCTGA GCGTCTTGGA TTGCATGGTA AAATTGATCT CATCGATGAG
TCTGATGGGA TGAAACCTAT TGAACGAAAG CGCGGGGACA GGTATTTTGA GAATGATGTT
ATCCAGTTAT GTGCATATGG GCTGCTTCTT GAGGAGTATC TTGGGAAACC TGTTGATACC
GGGATTTTGT ATTTATTTGG TACGAACCGG AGGGCCGAGA TTGCTCTGAC TGATTCAATA
AAACAGAAGA CTATCAGTGT CATTGAGGAT ATCAGGTCAA TGACCCCTGA TTCAATCCCT
GGGTTTATTG ATAATCCGAA AAAATGTACT AAATGTAGTG TACAACTCTA TTGTCTGCCG
TATGAATCTC ATGTTCTTGA AGGAGGGGAA GATGAATATT GA
 
Protein sequence
MVLKTRWIDD MINVSDINQF LYCPRRLFYL QFYQTQGVNE FLVDGRRKHQ RQGRRGGYVF 
ELYLSSERLG LHGKIDLIDE SDGMKPIERK RGDRYFENDV IQLCAYGLLL EEYLGKPVDT
GILYLFGTNR RAEIALTDSI KQKTISVIED IRSMTPDSIP GFIDNPKKCT KCSVQLYCLP
YESHVLEGGE DEY