| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mhun_1780 |
|---|
| Symbol | |
|---|
| ID | 3924362 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanospirillum hungatei JF-1 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_007796 |
|---|
| Strand | - |
|---|
| Start bp | 2010538 |
|---|
| End bp | 2011869 |
|---|
| Gene Length | 1332 bp |
|---|
| Protein Length | 443 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 637897400 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_503220 |
|---|
| Protein GI | 88603042 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1624] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 34 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATACGTC CTTCCGGTTA CATCTTTATC AGTAATCAGC ACCTTAGTAC TACTATGAAC
GCCATCTCCT GGTACCGGTA CCTGATGGTG TTTATTTTAG TTCTGACAGC AGTATCATAT
ATTACCCCCT GTTTTGCTGA AACATCGGTA ACCGGAACTG ATATCATCAC TCCAGTGGTT
ACGGCACCTG TTCCATTGGA TGAAATGACA ACCAAAGCGA CCATCGCTCC GATTCATACC
AAGGAGCCGG CGGTAAAGCC CCCGGTTGAA AACCCAAAGC CTGGAGTGAG CCCGACCCTT
CCCCCTCCGG TGCAAAGTCC GACCATGAGA CCGGCCCCGA GTACAGGGAC CGCCACACCA
ACCCCATCAC CAGTCAGTAC CATGACCGGA AATAATGAGA CGGCAGAGAC ATATTTCCAA
TGGGGACGGG CATATGAGGA TGTCGGGAAC TGTCAGGCTG CACTGGTTGA GTTTGAAAAA
GCGATTGCCC GCGATCCGTA TTATGCCGAT GCCTGGTACC ACCGTGCGAT CTGTTATGAA
AGACAGGGGA TGTATGATGA GGCATACGAC TCATATCGGT TCCTGCTGAC CATAGAGCCA
GGGTTTTTCT CTGATAATAA AAATGTAACA AAACCTCTGA CCTCGAATAT CAGTCCTGGA
GAGTTTCCAA AGCCCCCTGG TGAAGAGTCG GTGATGAACG GGCCGTTCTT CTGGATCCTG
ATCGGGACCG GAGTAGGCGG GCTTATTATC AGTGGTCTTG TTCTCTATCA TATTCGTCGG
CGTCCTGCTC CAGATGGAAC GGTTGTCCTG ACCAGGCAAT CCACAGGGCC TGTTACCAAC
GAGGAGCTAA GCGCGATCGC CGACCAGATT GCAGAGTACT ATGACGGGGA TAAGGAGATC
TGCATGCAGG TCATCAAACT TGCAATAGAG ATTGCCCGGG AGGGACGAGA AGGAAAACCG
GTAGGCACCG CCTTTGTCCT TGGTGATAGT GATGCTGTCC TCGAACGGTC CAGGCAACTT
ATCCTGAACC CCCTCGCCGG TCATTCCTCA ACAGATCGGA AGATTACCAA TCCGGACATG
CGGGAGAACA TCAAGGAACT TGCCCTTCTT GATGGTGCCT TTGTCATCAG GGAGGACGGG
ACGGTTGAAG CAGCCGGCCG GTATATCTCT ATTGATACCA GTAATGTCCA GCTCTCAAAA
GGATTTGGAA CCCGTCATGT TTCAGTTGCC GCAATTACGC AGGAGACAAA AGCGATCGGT
ATTGTCGTCT CTGAAAGTGG CGGGCAGGTC AGGATTATGG CAGAGGGCCG GATAATCCTT
GAGACCAGAT AA
|
|---|
| Protein sequence | MIRPSGYIFI SNQHLSTTMN AISWYRYLMV FILVLTAVSY ITPCFAETSV TGTDIITPVV
TAPVPLDEMT TKATIAPIHT KEPAVKPPVE NPKPGVSPTL PPPVQSPTMR PAPSTGTATP
TPSPVSTMTG NNETAETYFQ WGRAYEDVGN CQAALVEFEK AIARDPYYAD AWYHRAICYE
RQGMYDEAYD SYRFLLTIEP GFFSDNKNVT KPLTSNISPG EFPKPPGEES VMNGPFFWIL
IGTGVGGLII SGLVLYHIRR RPAPDGTVVL TRQSTGPVTN EELSAIADQI AEYYDGDKEI
CMQVIKLAIE IAREGREGKP VGTAFVLGDS DAVLERSRQL ILNPLAGHSS TDRKITNPDM
RENIKELALL DGAFVIREDG TVEAAGRYIS IDTSNVQLSK GFGTRHVSVA AITQETKAIG
IVVSESGGQV RIMAEGRIIL ETR
|
|---|
| |