Gene Mhun_1676 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMhun_1676 
Symbol 
ID3925182 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanospirillum hungatei JF-1 
KingdomArchaea 
Replicon accessionNC_007796 
Strand
Start bp1899176 
End bp1899886 
Gene Length711 bp 
Protein Length236 aa 
Translation table11 
GC content43% 
IMG OID637897303 
Productalpha/beta hydrolase 
Protein accessionYP_503123 
Protein GI88602945 
COG category[I] Lipid transport and metabolism 
COG ID[COG2267] Lysophospholipase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.0135197 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAATGA TAAAGAATAC AATGAAAATT AGCAATATCC CGGCTACCCT ATGGGGCGAA 
AAGAGCAACA AACTATTCAT TGCCGTTCAC GGAAATCTAT CTCATAAGGA AGATACCGTC
ATCGAACTTC TCGCAGATGA GGCTACTAGG AAGGGGTATC AGGTCCTGAG TTTTGATCTC
CCGGAACATG GAGACCGGAA AACGGAAGGA ACTCCGTGTA AGGTGCAGCA TTGTGTCCAA
GATCTCATAG AAATCGGGAG ATATGCTCAG GAGAACTGGA ATGAGGTATC GCTCTTTGCC
TGCAGCATGG GAGCATATTT CAGCCTGTTA GCTTATCGTG ATATTGAACT GAAAACAGCC
CTTTTTCTCT CTCCGGTTGT TGATATGGAA CGAATCATCA GAAATATGAT GATGTGGTTT
CAGGTAACTC CAGAGCAGTT GGAAAAAGAA GGGACGATAG ACACCCCGGT CGGTCAGAAG
CTGTATTGGG ATTATTACTG CTTTGTGTTA GAGCACCCGG TTGACAGATG GAATGTTGAT
ACCCGTATCT TATTTGGAGC AAAAGATAAT CTGGTCGAAT TTGATACGAT ACATAAGTTT
ACCGAAATAT TTCCGTGTAC CTTGGAAATT ATGGATGATG GAGAGCATTA TTTCCATACG
GATGAGCAGT TAGACGTATT CAAACAGTGG CTGGAAAAGA ATATTGAGTA G
 
Protein sequence
MQMIKNTMKI SNIPATLWGE KSNKLFIAVH GNLSHKEDTV IELLADEATR KGYQVLSFDL 
PEHGDRKTEG TPCKVQHCVQ DLIEIGRYAQ ENWNEVSLFA CSMGAYFSLL AYRDIELKTA
LFLSPVVDME RIIRNMMMWF QVTPEQLEKE GTIDTPVGQK LYWDYYCFVL EHPVDRWNVD
TRILFGAKDN LVEFDTIHKF TEIFPCTLEI MDDGEHYFHT DEQLDVFKQW LEKNIE