Gene Mhun_1380 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMhun_1380 
Symbol 
ID3923890 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanospirillum hungatei JF-1 
KingdomArchaea 
Replicon accessionNC_007796 
Strand
Start bp1577739 
End bp1579337 
Gene Length1599 bp 
Protein Length532 aa 
Translation table11 
GC content39% 
IMG OID637897017 
Producthypothetical protein 
Protein accessionYP_502839 
Protein GI88602661 
COG category 
COG ID 
TIGRFAM ID[TIGR02547] CRISPR system CASCADE complex protein CasA/Cse1 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.0528526 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.233123 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCCATC TATTACATGA TGCCTGGATT CCGGTTGTGA GAAAAAACGG TGATTCCGGT 
CTTATCGCTC CGCATCAGAT TACCTCGGAT TATGATACAA ATCCGGTGAT AGAACTTAAT
GCTTCACGTC CAGATTTTAA TGGAGCTCTT ATTCAGTTTC TGATAGGATT AATTCAGACT
GTCTGTCCTC CTGAATCGGA TAAAGAATGG ACTGACCGGT TAGATAATGT AATTCCTTCA
GATGTATTGA AGGGACACTT CAAGCAGATT CAGGATGCCT TCTCTCTGGA TGGTAAAGGC
CCCAGATTTA TGCAAGATAT CAGTATTGGT GATGAGAAGA AAAATTCAGT TGACGGTCTT
CTTATTGAAA TGCCTGGGGA GAATACGGTC AAGAAAAATA CTGATTTTTT TGTTAAACGC
GATACTGTAA AGCAGATGTG TCCCTCTTGT GCTGCTATGG CTTTATTTAC TCTTCAGGTT
AATGGACCAG GTGGTGGAGC TGGGCATAAA ACAGGTTTAC GAGGTGGGGG GCCATTAACG
TCTGTAATCT TGGGGGAGAC ATTGTGGGAG ACGGTATGGC TGAATATTAT TCCTTCAATA
AAATTTTTTG GAGATGCGAT AGCAAAACAA AAAAAGAGTA TGGATATGAT CTTTCCCTGG
TTTGGGAAGA TTCGCCTGAG TGATAAAAAG GAAAAAACTG GCGTGATCGA TGTTAATCCT
TTACAGATGT TCTGGGGGAT GGGAAGACGG ATATTACTTG ATTTTGAGGA CAAGCCGGTA
GGGGCCTGTG ATGTATGTGG TCTTGCATCT TCAGCAACCG TGTTGACATA TCATACGAAA
CCTCATGGAG TTGATTATGA CGAAACCTGG GACAATCACA CACTTACTCC TTATTACCTG
GATAAAGAAG TTTATCGCCC AATTCATCTT CAACCCGGGG GTATTACGTA TCGAAATTTT
ATGGGTCTGA TTATTCCGGA TTCGTCAAGG AATATCAAGG TTTCCAGAAC TGTAACAAAT
TTTCAGAATA ATATTATTCG TTTAAAGCGG AAATCATTTA AAAAGGTTAG GTTATGGTCA
TTTGGATATG ATATGGATAA TGCAAAAGCC AGATGCTGGT ATGAAAGCCG GATGCCAATC
TACCTGCTGG ATGATGAGAA AAAGAGAGAA TTATTTGAAA ATATTGTTTC AAATCTTATA
TTTACAGCAG AATATGTGTT GCAGTCTCTT GCCGGCTCAA TAAAGGACGC AATTTCAGGA
CATGGTAATA AAGGAAAAGA ACCTGTTGAT TTAAGATCCC GATTTTGGAA TGAGACTGAG
GAATTGTTCT ATGCTACACT TGATAGACTT TTTTTCTCTT TGGGAAATGT GGAGCAGATA
GATCAAATAA AGCGTGAATG GTATCGTATG TTAGTTGGTC ATTCTGTTTT GTTATTTGAT
TATTATACCC AGGTTTCACT CATCAGCGAT CTGAATGATC CTAAGAGTGT TATCGATGCC
CGAATCAAAT TTAAAAAATT TACCGGAGAG AACACGAAAA AAGTTATTTC ATTACTGGGT
CTTCTCATGA AGGACTCAAT GGAGGAGAAA AAGCTATGA
 
Protein sequence
MIHLLHDAWI PVVRKNGDSG LIAPHQITSD YDTNPVIELN ASRPDFNGAL IQFLIGLIQT 
VCPPESDKEW TDRLDNVIPS DVLKGHFKQI QDAFSLDGKG PRFMQDISIG DEKKNSVDGL
LIEMPGENTV KKNTDFFVKR DTVKQMCPSC AAMALFTLQV NGPGGGAGHK TGLRGGGPLT
SVILGETLWE TVWLNIIPSI KFFGDAIAKQ KKSMDMIFPW FGKIRLSDKK EKTGVIDVNP
LQMFWGMGRR ILLDFEDKPV GACDVCGLAS SATVLTYHTK PHGVDYDETW DNHTLTPYYL
DKEVYRPIHL QPGGITYRNF MGLIIPDSSR NIKVSRTVTN FQNNIIRLKR KSFKKVRLWS
FGYDMDNAKA RCWYESRMPI YLLDDEKKRE LFENIVSNLI FTAEYVLQSL AGSIKDAISG
HGNKGKEPVD LRSRFWNETE ELFYATLDRL FFSLGNVEQI DQIKREWYRM LVGHSVLLFD
YYTQVSLISD LNDPKSVIDA RIKFKKFTGE NTKKVISLLG LLMKDSMEEK KL