| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mhun_1358 |
|---|
| Symbol | |
|---|
| ID | 3923183 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanospirillum hungatei JF-1 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_007796 |
|---|
| Strand | + |
|---|
| Start bp | 1561687 |
|---|
| End bp | 1562850 |
|---|
| Gene Length | 1164 bp |
|---|
| Protein Length | 387 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 637896995 |
|---|
| Product | DNA helicase II |
|---|
| Protein accession | YP_502817 |
|---|
| Protein GI | 88602639 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0210] Superfamily I DNA and RNA helicases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.248341 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCGACT CTGTTAAGAC GGTAACGTAT TTTCTAAACC ATTACGCGAA CGGAGCATAT
GATGAGCAGA TGGATGATGA TCTGGCCGGT CTGAATGCGG TGAATCTGAT GACCATGCAT
CAGTCTAAAG GGCTGGAATG GCCGGTTGTA TTCATCCCTG CTCTGGTGAA CGGAAGGTTT
CCCTCAGCAA AAACCGGAAG AGAGCAGAGA TGGCTTCTTC CCCGTGATAT GTTCAATGTG
TCAAGGTATG AAGGTGACGT GGAAGGGGAA CGAAAGCTGA TGTATGTTGC TATGACGAGG
GCAAAGGAGC TGCTTGTCCT GTCATATTTT ACCACATTAA ACGGGAGGAA GAAGGGTGTC
AGCGAATTTA TCGAGGATCT GGCCGACTGT CCGGATATTG AGGTTCTTTC TCCCTTTACA
CATCTACCTG ATCTTTCATT GTCACAGCGT GGTGAGGATG ATGAGATCCA GACGTTTGCC
GCCGGCGAGC TGATTCACTA TAGTAAATGC CCGTACCGGT ACAGAATTAA TACCATATGG
GGATTTCAGC CGGGTATCAA CCCGTATCTT GGGTATGGAA ATGCTCTCCA TCATTGTATG
CGGGAAGCTG CCGAACTGAT GAAGGAAGGG TATGATCCGG TCACGGCGGT TGCAACATCG
GTTGAAGAGA ACTTTTTCAT GCCATTTGCC GATCCCGGAC GTGCAGAAGG TATGCGGGAT
GTGGTGATGG AGAAGCTGAT TCATTTTGCC GAAGCCAGGA AGGATGATAT GCTCCGGATT
CGTGAGGTGG AGACACGGAT TGAGTATCCC CTGATGCAGG CAACGGTTGC TGGGAAGGTA
GATGTGATTC TGCATGATAA TGAAGGGATA GAGATCCGGG ATTACAAGAC GTCTGATACG
GTGGTTACCG AGAATGATGC ATCGATGCAG ATAAGGCTCT ATGCCCGTGG ACTTACTGCA
ATTGGAGAGC AGGTGTGTTC AGGTTCGATT GCCTTTCTTG AGGATGCAAC GGTGGTTCCG
GTACCGGTGA GTGAAGAGAT GCTGACAAAG GCAGAGCACT TAGCTGAGAA AATAATTACA
GGAATTGTGA ACCGGGAGTT TTCAGCCTGC CCCGGGGATC AGTGTAAGGC ATGTGATTAT
GTGAAAATCT GCCGGTTTGT GTGA
|
|---|
| Protein sequence | MADSVKTVTY FLNHYANGAY DEQMDDDLAG LNAVNLMTMH QSKGLEWPVV FIPALVNGRF
PSAKTGREQR WLLPRDMFNV SRYEGDVEGE RKLMYVAMTR AKELLVLSYF TTLNGRKKGV
SEFIEDLADC PDIEVLSPFT HLPDLSLSQR GEDDEIQTFA AGELIHYSKC PYRYRINTIW
GFQPGINPYL GYGNALHHCM REAAELMKEG YDPVTAVATS VEENFFMPFA DPGRAEGMRD
VVMEKLIHFA EARKDDMLRI REVETRIEYP LMQATVAGKV DVILHDNEGI EIRDYKTSDT
VVTENDASMQ IRLYARGLTA IGEQVCSGSI AFLEDATVVP VPVSEEMLTK AEHLAEKIIT
GIVNREFSAC PGDQCKACDY VKICRFV
|
|---|
| |