Gene Mhun_1327 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMhun_1327 
Symbol 
ID3922845 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanospirillum hungatei JF-1 
KingdomArchaea 
Replicon accessionNC_007796 
Strand
Start bp1515013 
End bp1515501 
Gene Length489 bp 
Protein Length162 aa 
Translation table11 
GC content39% 
IMG OID637896964 
ProductPadR-like family transcriptional regulator 
Protein accessionYP_502786 
Protein GI88602608 
COG category[K] Transcription 
COG ID[COG1695] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.00110327 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00407043 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
GTGTTTATCA TGAAAAATAT CTGGAAATTT GCTCCTGAGG ATGGAAAAGA GAGAGGGCTA 
CTCACCCTTC TCGTCCTTCA TTTCCTGGAG AAAAAACCAC AATCTGGATA TGAACTGCTA
AAGGAGATCG ATGAGACAAC CGATAGTACC TGGGTGCCAA ATAAAGGGAC TTTGTATCCT
CTTCTGAAAT CATTGGAGCA GGAGGGCTTG ATACAAGTGA AAGAGGTAGG CAAACGATCA
AAGATTACGT TTGAACTAAC AGAAGATGGA AGACAGATGC TCTCCACTCT GAAAGGGAAA
AAAGAAGAAG CAGAGACGAG GGTTACTTTC TTCAAAAAAT TGCACCGGGA AGTATTTGGC
GAAGAAAATT TCTCTTTCAT CAATTTTATG ATGGATGTCA GGTTTTACGT CGAAGATCTT
CCTGAAGAGA AAAAACCGGC AGCAATTAAA ATTTTACAGA CAGCCTTTGA CGAGATAAAA
AATTTATAA
 
Protein sequence
MFIMKNIWKF APEDGKERGL LTLLVLHFLE KKPQSGYELL KEIDETTDST WVPNKGTLYP 
LLKSLEQEGL IQVKEVGKRS KITFELTEDG RQMLSTLKGK KEEAETRVTF FKKLHREVFG
EENFSFINFM MDVRFYVEDL PEEKKPAAIK ILQTAFDEIK NL