Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mhun_1327 |
Symbol | |
ID | 3922845 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanospirillum hungatei JF-1 |
Kingdom | Archaea |
Replicon accession | NC_007796 |
Strand | + |
Start bp | 1515013 |
End bp | 1515501 |
Gene Length | 489 bp |
Protein Length | 162 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 637896964 |
Product | PadR-like family transcriptional regulator |
Protein accession | YP_502786 |
Protein GI | 88602608 |
COG category | [K] Transcription |
COG ID | [COG1695] Predicted transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.00110327 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 3 |
Fosmid unclonability p-value | 0.00407043 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | GTGTTTATCA TGAAAAATAT CTGGAAATTT GCTCCTGAGG ATGGAAAAGA GAGAGGGCTA CTCACCCTTC TCGTCCTTCA TTTCCTGGAG AAAAAACCAC AATCTGGATA TGAACTGCTA AAGGAGATCG ATGAGACAAC CGATAGTACC TGGGTGCCAA ATAAAGGGAC TTTGTATCCT CTTCTGAAAT CATTGGAGCA GGAGGGCTTG ATACAAGTGA AAGAGGTAGG CAAACGATCA AAGATTACGT TTGAACTAAC AGAAGATGGA AGACAGATGC TCTCCACTCT GAAAGGGAAA AAAGAAGAAG CAGAGACGAG GGTTACTTTC TTCAAAAAAT TGCACCGGGA AGTATTTGGC GAAGAAAATT TCTCTTTCAT CAATTTTATG ATGGATGTCA GGTTTTACGT CGAAGATCTT CCTGAAGAGA AAAAACCGGC AGCAATTAAA ATTTTACAGA CAGCCTTTGA CGAGATAAAA AATTTATAA
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Protein sequence | MFIMKNIWKF APEDGKERGL LTLLVLHFLE KKPQSGYELL KEIDETTDST WVPNKGTLYP LLKSLEQEGL IQVKEVGKRS KITFELTEDG RQMLSTLKGK KEEAETRVTF FKKLHREVFG EENFSFINFM MDVRFYVEDL PEEKKPAAIK ILQTAFDEIK NL
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