| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mhun_1325 |
|---|
| Symbol | |
|---|
| ID | 3922843 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanospirillum hungatei JF-1 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_007796 |
|---|
| Strand | + |
|---|
| Start bp | 1510306 |
|---|
| End bp | 1514370 |
|---|
| Gene Length | 4065 bp |
|---|
| Protein Length | 1354 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 637896962 |
|---|
| Product | CoA enzyme activase |
|---|
| Protein accession | YP_502784 |
|---|
| Protein GI | 88602606 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG1924] Activator of 2-hydroxyglutaryl-CoA dehydratase (HSP70-class ATPase domain) |
|---|
| TIGRFAM ID | [TIGR00241] CoA-substrate-specific enzyme activase, putative |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.222648 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 3 |
|---|
| Fosmid unclonability p-value | 0.00889318 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | decreased coverage |
|---|
| |
Sequence |
| Gene sequence | ATGAACACAT TAACATCCCA AATGAAATCA GATCCGGACC ATTCGGATCT CGCTGATGAA
AAGATAAACC CAGAAACATA CAGTATCGGT ATTGATATCG GATACTCATC GATCAAAATC
GGCCTGGTGA ACAGTTCTTT GCAACCAGTA TATGCAGATT ACATCCTTCA TAAAGGAAAA
ATCAAAGAAA CCCTGCAGAA AATACTTGCA ACGCTTGCAG GGCAGTATGA TCCAACATCA
ATAACACATG GGGCGGTAAC CGGAAGTGAA TCAAAATGGA TATCCAAAGA TCAGACCATT
CATCACGTCA ATGATGTATC GGCACTCCTT GAAGGGAGCC TGTGCCTGGA TGATTCGGTT
CATTCAATCA TTGATATCGG GGGACAGACC GCCAGGTATA TTACCGGATT TACGAGCAGG
GAAAAATCAT GCATCGAAAT TTCTATGAAC TCCAATTGTG CTGCAGGGAC GGGTTCATTT
CTTGAAGAAC AGGTGTCACG GCTGAATCTG TCTATTGAGG ATTATGCAGC CTATGCGGCT
AAAAGTTCAA GCATTCCACG AATTGCCGGG AGATGCAGTG TATTTGCCAA AACCGACATC
ATCCATCATC AGCAGGAAGG TGTTCCAGTT GAGGATATTC TCCAGGGTCT TGCATATGCT
CTTATCAGGA ATTACCGGGG AGCAGTAATC AAAAAACTGC CCATTACAAG ACCAGTATTC
TTCGCTGGCG GAGTAGCACA CAATGACGCT ATTGTCAATG CCATATCAGA CATCCTAGAT
CTCTCTGATG GAAAACTCAT CGTTTCAGAT TTGAGTGGAA ATGCTGCAGC AATAGGAACG
GCAATTATTG CTAAGCAGAA TAATCTGACA ATCTCACCTG ATGAATTATC CTCGATTCTC
ACCCGCAACG AATGCAATTC AAACAATTCG GAACTCAGCC TGCCAGCTCT TGCCCGGTTC
GGAAAGGAAG ACTGCACAAA CAAACATATC TGTGCTCCAA TCTCTTCAGG AGATGAGATA
ACCGATTGTT TTCTAGGCAT TGATATCGGT TCAACCAGTA CAAACCTGGT TCTCATGAAT
GAAAACAAGG AGATTGTTGC ATTCAGGTAT CTAAGAACTC TGGGAGACCC ATTCCATGCA
GTCAGTACCG GGCTTGCTGA CCTTGGAAGA GAATTCAAAG ACAAGGTACG GGTTATCGGA
GTTGGAACAA CCGGTTCAGG ACGGTACATG ATTGCAAGGC TGTTCGGAGC TGATGTTGTG
AAAGATGAGA TCACCGCCCA GGCAAGAGCT GCAATCACGC TTGATCCCCT GGTAGATACC
GTGTTTGAAA TCGGCGGTCA GGACTCCAAG TTTATCAGCC TGAGAAATGG TGTCGTCACT
GACTTTCAGA TGAATAAGAT ATGTGCTGCA GGTACCGGAT CATTTATCGA AGAGCAGTCC
AAAAAATTCG ATATTCCCAT TGATGATTTT GGAGATAAGG CACTTGCCAG TACAAAACCG
GAGTATCTTG GTGAACGGTG CACCGTATTC ATCGAAACCA GTATTGCCGC CTGCCTTGCC
AATGGAACTA GTACTGAAGA TATCGTATCA GGCCTGTGCT ATTCCATTGT GAAAAATTAT
CTGAACCGGG TGGTCGGACA GAAGAAGATC GGAGATCGGA TATTCCTGCA GGGAGGTATC
GCCTATAACC AGGGAGTGAT CAACGCATTC CGTTCACTGA CCGGGAAAGA GATCATTGTT
CCTCCATTCT TTAGTGTGAC CGGAGCCTAT GGAGCGGCAA TCCTGACCTG CGAAGAGATG
GGATCACGGA AGACCTCATT CAAAGGATTT GACCATATCG CCTCATCCGG TGAGGGAGAG
ATAGAAAAAG TAGCGAATTC CGATTCAGGA TCTGATTTTG AAGAGATGGT CACGGACCTT
ATCTTTGAAG GGTATGATGG AACACTGGAT CCCAGTAAAA AGACCATCGG AATCCCACGG
GCTCTCTTCA CCTATGGCAT GTATCCAATG TTTGACGCCT TTTTCCGAGA GCTGGGGTAT
AATGTCCTCC TGTCAGATCC GACAAGTGAA AAGACCATCT GGCTCGGACA GGATTATTCA
CTTGACGAGA CCTGTTACCC GGTCAAACTG ATCAATGGTC ATGTGGCAGA GCTGGTGGAG
AAAAAGGTGG ACTACATCTT TTTCCCAGAC CTGTACACGG TTGTTCACCC AAACTCCCAT
ACCCGCCAGG ATTTTGGCTG CCCGTACATG CAACTTGCAT TCAAACTGGT AAACCGGGCA
ATGGAACTTG ATACGAAAGG CATCAAACTG CTTGCTCCTA CCATCGGTTT TAGTCTTGGT
GAACAATTCA TGAAAAACAG TTTTATGAAT CTTGGAACGA TGCTTGACCG GACAACGGAG
GAAACAGGGA AAGCCCTTCA GAAAGGGATG CAGGCATTCC ATGATTTTGA AACCCGGATT
ATGGAAAAGG GGAAACAAAT CGTGCAGGGC CTTCAGGCTG ATGAAAAGGC ATTTGTCCTG
ATTTCAAAAA CCTACGGGGT AGCAGATCCT GTCTTAAACC TTGGTATCCC CGGAAAACTG
AAAGAGATGG GATATAAAAC CCTTGCATTC TATAACCTCC CGGAATGTGA TGTTTCGAGC
GAACACCCAA ACATGTTCTG GCCATTTGGT CAGCATATCC TCGAAGCGGC GCAGGTTGTC
AGGCAACATC CAAACCTGTA TGCAATCTTC CTGACCCATC ATGGATGTGG TCCGGATACC
GTATTCACCC ACTATTTCAA GGAGATTATG GGAGATAAAC CATATCTGAA CATAGAAGTT
GATGAACATT CTTCAGGAGT CGGTGTGATA ACCAGACTTG AAGCATTCGT AAACAGTCTG
AACCATATAC CCTCACAGCC TGCAGAGGAT ATGAATTGTT ACCCGGAACG TGTTCCTCAC
CCGAAAGCCG GGATAACAAC CAACGGTCTT GCATTTTCCA GTTCCTGTGA GTATTACCTG
CCTGATCTCT ATCCATATTC CGGACTTTTT TGCGAACATT TCAGTAAAAA AGGAATCCGT
GCTCACCCGT TTCCACCTAC GAGTGAAAAG TCCATTGATG AAGGGAGAAA ACACACCATA
ACAAATGAAT ACTTCTCAAT GGCTGCACTT GTCGGTGATG TACTGAATAT TCCGGACATT
CGAAACAAAG GAGATATCCC AAAAGTTCTC TTCATTCCAC AGAACGAGGG AGCAGAAGTT
GACGGGCAGT ATAACAGGTT TATACGCACG ATTCTTGATG AAGAAGGGCT ATCTCACGTC
TGGGTTGAAT CTCCGTTCAT TGAAGATATC ATATACGAGG ATGAGAGTTT TCTCACATCA
CTCTTCTGTC TCCTCATTGC AGGAGACTTA ATTCTGGTGA CCCCCGTGTC TGACCGGGCC
AGGTACCTGA ACCAGATGAA AGGTATGATA CAGAGAAATG AACTTGATAT CCGTTCTCTG
AAAAGAGTCG CCTGGGAGAT TTCAATGATC CTGCAGTCAG CACCTCCGGA AAAAACCATC
CTTGCCATAG GTGAGCCACT CATTCTCTAC AATGATATGC TGAATAACCA GATCCTGAAT
GGATTAGAAG AGAACAACGT CCGGGTTATG TTTGCACCTT TGAGCGAATG CTTCTGGCAG
ACCTGGAAGG ATTACATTCT CCAGTACGGG AACGACAGGA CTGATGTCCT CTTAAAGAAA
CTTGCCATAC TCGAAGATTA TATGAATCAA ATCCATCAGG TACTTGGTGT ATTCAGCCCA
TATGAAGAGA AAACAGAAGA CCTTATCAGA CTCGCAGATG CCACCACCGG GTACTATGCC
GGTGGATTTG GAAGATACAG GGAGGCAAAA GTTCTTGGGT TACCGTCATC GGTCAAAGGC
GTGATAACCG TTTCATCAAT GTATGAAAAC ACCGGAATCC TGCTTAATAC TCTTCATAAA
GGATTTGAAT CAGACCACCA GAAGCCGGTG CTAAACCTGA CATTTGACGG AACACACAAT
GACCATGACA AAAGCAAGGT TGAATCATTT CTCTACTATC TGTAA
|
|---|
| Protein sequence | MNTLTSQMKS DPDHSDLADE KINPETYSIG IDIGYSSIKI GLVNSSLQPV YADYILHKGK
IKETLQKILA TLAGQYDPTS ITHGAVTGSE SKWISKDQTI HHVNDVSALL EGSLCLDDSV
HSIIDIGGQT ARYITGFTSR EKSCIEISMN SNCAAGTGSF LEEQVSRLNL SIEDYAAYAA
KSSSIPRIAG RCSVFAKTDI IHHQQEGVPV EDILQGLAYA LIRNYRGAVI KKLPITRPVF
FAGGVAHNDA IVNAISDILD LSDGKLIVSD LSGNAAAIGT AIIAKQNNLT ISPDELSSIL
TRNECNSNNS ELSLPALARF GKEDCTNKHI CAPISSGDEI TDCFLGIDIG STSTNLVLMN
ENKEIVAFRY LRTLGDPFHA VSTGLADLGR EFKDKVRVIG VGTTGSGRYM IARLFGADVV
KDEITAQARA AITLDPLVDT VFEIGGQDSK FISLRNGVVT DFQMNKICAA GTGSFIEEQS
KKFDIPIDDF GDKALASTKP EYLGERCTVF IETSIAACLA NGTSTEDIVS GLCYSIVKNY
LNRVVGQKKI GDRIFLQGGI AYNQGVINAF RSLTGKEIIV PPFFSVTGAY GAAILTCEEM
GSRKTSFKGF DHIASSGEGE IEKVANSDSG SDFEEMVTDL IFEGYDGTLD PSKKTIGIPR
ALFTYGMYPM FDAFFRELGY NVLLSDPTSE KTIWLGQDYS LDETCYPVKL INGHVAELVE
KKVDYIFFPD LYTVVHPNSH TRQDFGCPYM QLAFKLVNRA MELDTKGIKL LAPTIGFSLG
EQFMKNSFMN LGTMLDRTTE ETGKALQKGM QAFHDFETRI MEKGKQIVQG LQADEKAFVL
ISKTYGVADP VLNLGIPGKL KEMGYKTLAF YNLPECDVSS EHPNMFWPFG QHILEAAQVV
RQHPNLYAIF LTHHGCGPDT VFTHYFKEIM GDKPYLNIEV DEHSSGVGVI TRLEAFVNSL
NHIPSQPAED MNCYPERVPH PKAGITTNGL AFSSSCEYYL PDLYPYSGLF CEHFSKKGIR
AHPFPPTSEK SIDEGRKHTI TNEYFSMAAL VGDVLNIPDI RNKGDIPKVL FIPQNEGAEV
DGQYNRFIRT ILDEEGLSHV WVESPFIEDI IYEDESFLTS LFCLLIAGDL ILVTPVSDRA
RYLNQMKGMI QRNELDIRSL KRVAWEISMI LQSAPPEKTI LAIGEPLILY NDMLNNQILN
GLEENNVRVM FAPLSECFWQ TWKDYILQYG NDRTDVLLKK LAILEDYMNQ IHQVLGVFSP
YEEKTEDLIR LADATTGYYA GGFGRYREAK VLGLPSSVKG VITVSSMYEN TGILLNTLHK
GFESDHQKPV LNLTFDGTHN DHDKSKVESF LYYL
|
|---|
| |