| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mhun_1194 |
|---|
| Symbol | pgk |
|---|
| ID | 3924209 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanospirillum hungatei JF-1 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_007796 |
|---|
| Strand | + |
|---|
| Start bp | 1359932 |
|---|
| End bp | 1361158 |
|---|
| Gene Length | 1227 bp |
|---|
| Protein Length | 408 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 637896835 |
|---|
| Product | phosphoglycerate kinase |
|---|
| Protein accession | YP_502660 |
|---|
| Protein GI | 88602482 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0126] 3-phosphoglycerate kinase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.622987 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 5 |
|---|
| Fosmid unclonability p-value | 0.0429324 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGGCACAT ATTCAAAAAT TAAAGGATTA TCTGACGTTG ATATTTCAGG AAAGACAGTT
CTGCTCAGGG TTGATTTTAA TTCACCAATC GATCCCCAGG CCGGAGTTAT CCTTGATGAT
AAGCGCTTTC GTGAAATTCT GTATACGATA AAAGCATTGG ACAAGGCAAA AACCGTCATC
ATCACTCATC AGAGCAGACC TGGAAAAAAG GATTTTACTT CTCTTGTCTC CCATGCTCAC
CGACTTTCAG AACTCCTGGG AAAAGAGGTC AGATTTGTTG ATGATATCTT TGGAACATGT
GCCCGGGATG CTGTCCGCAA TGCAAAAGTT GGCGATGTTA TCATGCTGGA AAATGTCCGG
TTCAATGCAG AAGAGAACCT GAAACTATCC GGTGAGGAGT CAGCAAAGAC CGTTCTTGTG
AAAAACCTTG CACGAATGGG CGATCTCTTC ATCAATGATG CATTTGGTAC TGCACACCGG
TCCCAGCCAA CCATTGTCGG CCTTCCGGAA GTGCTCCCTG CCATAGCCGG ACTCCTTATG
GAACGGGAAG TTGAAAACCT CTCACGAGTT TTCAGTGGTG CTCCCCGGCC GGTGACATTC
ATCCTTGGCG GAACAAAGGT TGATGATTCA ATCGATGTTG CCAGACATGT ACTCACGAAC
GGCATCGCTG ATAACGTCCT TGCGGTCGGT GTGGTTGCTA ACATTTTCCT TGCCGCCAAA
GGGTACAGCA TCGGAAAACC TTCGATGGAC CTGATTGAAC AACTCGGATA CATTGGACAG
ATCGAAATCG CGAAAGATAT CCTTTCCAGG TTCGGTGAAA AGATCGTCGT TCCTGAACAT
GTCGCGATAA AAAAAGAGGG TGCCAGGGTT GAGATGCATG TCCGTGATAT CCCATCAGAC
TGCCCTATTC TGGATCTTGG ATCTGAAGGG CTCATACCCT GCCTTGATGT TATTAAAAGA
TCCCGCACCG TTGTATTAAA TGGTCCGGCC GGTCTTTTTG AAGAGTCTGA TTACTCATTC
GGAACATATG AAATAATTAA AGCTGCAGCA GAAGCTGAGT TTTCCGTCGT CGGGGGAGGA
CATACTGCCG CTGTCATTGA AAAGATGGGA TATGATAGAA AGTTCACCCA CATCTCAACC
GGTGGCGGTG CATGCATAGA ATTTTTAACC GGCAAGAAAC TACCAGCTAT AGCTGCCCTG
GAAAAAAGTG CTGAACGGTT TACATAG
|
|---|
| Protein sequence | MGTYSKIKGL SDVDISGKTV LLRVDFNSPI DPQAGVILDD KRFREILYTI KALDKAKTVI
ITHQSRPGKK DFTSLVSHAH RLSELLGKEV RFVDDIFGTC ARDAVRNAKV GDVIMLENVR
FNAEENLKLS GEESAKTVLV KNLARMGDLF INDAFGTAHR SQPTIVGLPE VLPAIAGLLM
EREVENLSRV FSGAPRPVTF ILGGTKVDDS IDVARHVLTN GIADNVLAVG VVANIFLAAK
GYSIGKPSMD LIEQLGYIGQ IEIAKDILSR FGEKIVVPEH VAIKKEGARV EMHVRDIPSD
CPILDLGSEG LIPCLDVIKR SRTVVLNGPA GLFEESDYSF GTYEIIKAAA EAEFSVVGGG
HTAAVIEKMG YDRKFTHIST GGGACIEFLT GKKLPAIAAL EKSAERFT
|
|---|
| |