| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mhun_1132 |
|---|
| Symbol | |
|---|
| ID | 3922510 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanospirillum hungatei JF-1 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_007796 |
|---|
| Strand | - |
|---|
| Start bp | 1273908 |
|---|
| End bp | 1275074 |
|---|
| Gene Length | 1167 bp |
|---|
| Protein Length | 388 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 637896771 |
|---|
| Product | DNA primase, small subunit, putative |
|---|
| Protein accession | YP_502600 |
|---|
| Protein GI | 88602422 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG1467] Eukaryotic-type DNA primase, catalytic (small) subunit |
|---|
| TIGRFAM ID | [TIGR00335] DNA primase, eukaryotic-type, small subunit, putative |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGACCTG CTACCCGGAT ATTTATTAAA CAACGGTTTA CCGATTACTA TGATAAAGCC
AGAATATCCC CTCCTTCATC AGTAAAGGAG AGGGAGTTTG GTTTTATCTT CTTTGATGAC
CGGTACCCTG ATGATATCAG GATGAGGCGT CATATCGGGT TTTCATCCGG GGATGAGATG
CAGGAGTATG TGAAAAGTCT GGTCCCTGCC CATGCGTACT ACTCAACAGC ATATTACCGG
ACTCCGCAGG CTCCGACAAT GGGCGACAAA GAATGGCTGG GGGCTGATCT CATCTTTGAT
CTTGATGCGG ATCACATCAT GCGGGGATCG TATGAAGCGA TGCTTGAGCG GATCAAGGGA
GAGGCTGAGA AATTACTGGA TGTCCTTGAC AATGAGCTGG GAATTGACAT GCGGACGATA
AAGCTGGTCT TTTCAGGGGG ACGAGGGTAT CATGTTCATG TTCAGGAACT GGCATTCCGT
GATTTTGAAC CGGCTGAACG GCGGGAGCTG GTTGATTATG TCTGCGGGAC CGGTATCAGT
CCTTCTCTTC TCCTTCATGA CTGGAAACCG GGGAGACGTG GATGGCATGA CCGTTTCAGA
CTCGTTCTCA CCAGGTATCT TCAGGATCTC AGCACCAGGC CCATAAAAGA AGTGAAAGCA
GAATTATCTT CCTTACGAGG TGTCGGGCAG GTCATGGCAG AACGGTTTGC CGGAATGATA
CCGGAACTCA TCACGCTGCT GAATACCAAT CCCTCATCGA TCCTTCTCCG TGACCAGACG
GTAAGGACCG TTTTTGGAGC CCTGACTTCG GAGCGGGAGA GTACCCTTCT CCCTCATATC
AGGGAGGCTG CAGTACAGGC TGATGAACCG GTTACTACGG ATACCCGGCG GCTTATCCGA
CTACCTGGTT CCCTTCATGC AAAATCCGGT TTTAAAGTGG TTCCGATGGA GGTGAAGGAA
CTTCATGATT TTGATCCGCT TATCGATGCA GTTGCTTTTG GAGAGCGTGA GGTCATCATC
GAATCAGAGC GGGAGTACTC CTTCTCCCTT CTTGGATCAT CATACGATAT CCCGAAAGGC
CGGTTAAAAG TCCCGGAAGC CGTTGGAGTA TTTCTCTGCT GCAGAGGGAT GGCAGAGATC
GGGGGGGTTT TGGATCATGC ATCTTGA
|
|---|
| Protein sequence | MRPATRIFIK QRFTDYYDKA RISPPSSVKE REFGFIFFDD RYPDDIRMRR HIGFSSGDEM
QEYVKSLVPA HAYYSTAYYR TPQAPTMGDK EWLGADLIFD LDADHIMRGS YEAMLERIKG
EAEKLLDVLD NELGIDMRTI KLVFSGGRGY HVHVQELAFR DFEPAERREL VDYVCGTGIS
PSLLLHDWKP GRRGWHDRFR LVLTRYLQDL STRPIKEVKA ELSSLRGVGQ VMAERFAGMI
PELITLLNTN PSSILLRDQT VRTVFGALTS ERESTLLPHI REAAVQADEP VTTDTRRLIR
LPGSLHAKSG FKVVPMEVKE LHDFDPLIDA VAFGEREVII ESEREYSFSL LGSSYDIPKG
RLKVPEAVGV FLCCRGMAEI GGVLDHAS
|
|---|
| |