Gene Mhun_1108 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMhun_1108 
Symbol 
ID3922141 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanospirillum hungatei JF-1 
KingdomArchaea 
Replicon accessionNC_007796 
Strand
Start bp1251042 
End bp1251560 
Gene Length519 bp 
Protein Length172 aa 
Translation table11 
GC content50% 
IMG OID637896747 
Productorotate phosphoribosyltransferase 
Protein accessionYP_502576 
Protein GI88602398 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0461] Orotate phosphoribosyltransferase 
TIGRFAM ID[TIGR00336] orotate phosphoribosyltransferase 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.10081 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTAACCG CTACATTGCG TGAGATGCTC ATATCAGCTG AAGCCATACG ATTTGGAGAT 
TTTACCCTTG CGTCCGGGAA AAAAAGCACG GTATATATTG ATATCAAAAA AGCGATCACA
AGCCCGGCCA TTCTGAAAAA GATTGCAGCA GAGGTTCTTA CCCACAGCAC GGACTTCGAT
GCAGTCGCAG GTGTTGCCGT CGGAGGGGTC CCCCTTGCGG TGTCAGTCTC CCTTGCCTCT
GATAAACCGT ATGTGATCAT AAGGAAAGAG CAGAAAGGAC ATGGTCTTGC CAGCCTTATC
ATCGGTGATG TAGCTGGAAA GAGGATTCTG CTCGTTGAAG ATGTCACCAC TTCCGGTGGG
TCTGCAGTAT TCGGGATTGA ACAGCTCCGC TCTGCCGGTG CAGTCGTAAC CGATGTCATA
GCAGTAGTTG ACCGGAATGA AGGTGCTGGA AAAACACTGC AGGGCCTTGA CATCACACTG
ACCCCCCTGG TCAGGATGCA GGATCTTATA AATGGGTGA
 
Protein sequence
MVTATLREML ISAEAIRFGD FTLASGKKST VYIDIKKAIT SPAILKKIAA EVLTHSTDFD 
AVAGVAVGGV PLAVSVSLAS DKPYVIIRKE QKGHGLASLI IGDVAGKRIL LVEDVTTSGG
SAVFGIEQLR SAGAVVTDVI AVVDRNEGAG KTLQGLDITL TPLVRMQDLI NG