Gene Mhun_0960 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMhun_0960 
Symbol 
ID3923809 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanospirillum hungatei JF-1 
KingdomArchaea 
Replicon accessionNC_007796 
Strand
Start bp1070679 
End bp1073018 
Gene Length2340 bp 
Protein Length779 aa 
Translation table11 
GC content39% 
IMG OID637896596 
ProductCheW protein 
Protein accessionYP_502429 
Protein GI88602251 
COG category[T] Signal transduction mechanisms
[N] Cell motility 
COG ID[COG0835] Chemotaxis signal transduction protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0366627 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.772368 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATACAG GTGAGAATAA ACATTCGGGG AGAAGAGGGC TGTTCATGGT CACTGAAAAT 
GATAAAAAGC AGCCAGAAAA GGAGATGGTT GTTCCAGACT ATACAGAAAT TATCAACAGG
ATTCTGAACT TTAAACAGGG GGAAATCCCG GAAGTACCGG AAGAGTTTGT GCCAATATTA
AACCGGTTAC AACAGGACAC TGAAATCCTT CAGAATGAAA AACAGGCCAT TCTAGAACTG
ACCAGAGAAT TAGATCTATT GAAAGAAGAA CAGGACATAA TAAAAAAGGA ACATGAAAGT
TACCTCTCCG ATCTGATTTC CGCTCATACT GAATTTGATA GAGCACTGGA GATATTTCAG
TATCATACCA TCCCTATGGT TCTTTTGGGA TCTGAACAGC AGATCATGGA TGCAAATGAC
ATATTCTGCT CGATCTTCTC TGTTGAACGG AGTGAAATAA CCAGGCATTT TCCACCTATT
ACTAAATATG TCTCTGATAA ACCACCTTTT ACCGCTCCGG ACGGCAACCA ATATTCTATT
GTTACAATAA AACCCCCAAT TGTTCCTTTT GATCATGATG CAGTTTCACT CGAACTCTTT
ATACCCTATC TGCCCCCGGG AGAGCCGAAA ACAAAAGAAG TAGTATCCAG AGAGATATTA
GAGAAAGCAC TATCAAAAAT CCTTCTTCCG GTTGCAATAA TCGATGGGCA TAACACAATC
AAATATATAA ATAATGCACT TCTGGAATAT CTTGCACGGG ATTATCAGGA TATCTATCTT
CGTGATATTG CAAGTTGTGG CTTTTCCGGA GAGATAAAAG AAAAAATTGA AGAAACTATA
ACAACCGGAA CAAAAATCGC ATATCAGACA TCAATTCTGC ATCGTGACAA TACCTCTATT
CAGGTATGGA TCGAATTATT TCCTCTTACA TGTGAAGAAG AGGCATACAT TTTACTCGTT
CTCTTCCCTG ATGAAGAAGA GGAGGTCAAT AATACCGAAG AAATCTCTCA GAATCTTTCG
GAACTGAGGA CGTCCTTTTT AAAAACTCTT CTGGACCTCA ATCCTTCACC GATGGTTCTG
TTTAATGATG CATCTGAAAT TATCCTCGCA AATGAAGGTC TTTCAGAGCT TATAGGCGTG
TCTTCCGAAC AATTACAAGG CCAGAGATTG TCAGACATCG GGATTAGGGT ATCCGGTTTT
TCTGGAACGA GTGAAGAGAT GGAGATACTT CCAGACAACA TCTGTATTGA GTCACCATAT
GGGGTGCAAT GTTACTCAGG TCTCCTCATT GCCAATCATC AATCAAATCA GAATCAATAT
CTTCTGATTC TTCAACCACC GGTTGATGTT CCAATCCAGC AGGATAAGCA ACAAAGTCCG
GATATCATTG AAACAGTACA GAATGATTCA CCGTCTATTC AGACAGAGAC TGATATTCAT
CCAGATTTTT CCCAATCAAT TCAATTCTCT TCCATTTCGA TTCCCGGACT TCTTATTGAA
GATTCAATTA TAAAAGAAAT TAATCAGTCA TTTAAAGATT GGAGCGGAAT TCAGGATGAA
AATATTTCAG AATATGCACA AATTCTCATC TCTCATACGG TCCAGGCCAG GGAGAACAGA
TCTTTGGTAT TTTCATCACT CTATCCCGCA GGTCTGAAAT CATATCAGAT TCAGATTCAG
CCGAGTATCT CTTTGCCTGA TAAAAATATC TACTGGTTTA TTGATCAATC CGAAGCACAG
GAATCAATCG CATCATTACA GAATCAGATA GAGAGTTTAC ATTCCGAACT GACTTCAATA
AAAAATAATC TTCAAGAGGA ACGTTCTGCA ATGAAAACTT CTGAAGATAT ATCCGGGCAG
ATAGATATCG TTGAATTTGA ATTATCCGGT GGAAGATATG CAATGGATAT TGGGATGGTT
CGGGAAGTCG TCGAGATGCT TCCAATAACC CCACTTCCAA AGACTCCTCC TTATATCATT
GGTATCATCA ATCTGAGAGG TGAAGTAACC CATGTCATAG ATCTTGCAGT ACTTCTTGGA
GAACGGATTA AGAAAGACCG AAGTGGCCAG AAGATTATCA TCGTTCCTCC TGATGCAGCG
CATGGAGAAC ATCTTGGAAT TATTGTGGAT AATGTTCGAA GTGTCACCGA AATCGGGGTG
CGTCAGGTAA CTGCTCTTGG AGATGAAATC AATGAGCGGA TTCAAACCAG GATTAAAGGC
ATCATTAAGG TCACTCATGA TGACCTTATA GAGAAACGTG AAGGAGAAGA GAAGGAAGCA
AACCTTGTTA TTTGGCTTGA CATGAAAGAA ATATTAAATC GTATGGCAAG TCTTCACTAA
 
Protein sequence
MDTGENKHSG RRGLFMVTEN DKKQPEKEMV VPDYTEIINR ILNFKQGEIP EVPEEFVPIL 
NRLQQDTEIL QNEKQAILEL TRELDLLKEE QDIIKKEHES YLSDLISAHT EFDRALEIFQ
YHTIPMVLLG SEQQIMDAND IFCSIFSVER SEITRHFPPI TKYVSDKPPF TAPDGNQYSI
VTIKPPIVPF DHDAVSLELF IPYLPPGEPK TKEVVSREIL EKALSKILLP VAIIDGHNTI
KYINNALLEY LARDYQDIYL RDIASCGFSG EIKEKIEETI TTGTKIAYQT SILHRDNTSI
QVWIELFPLT CEEEAYILLV LFPDEEEEVN NTEEISQNLS ELRTSFLKTL LDLNPSPMVL
FNDASEIILA NEGLSELIGV SSEQLQGQRL SDIGIRVSGF SGTSEEMEIL PDNICIESPY
GVQCYSGLLI ANHQSNQNQY LLILQPPVDV PIQQDKQQSP DIIETVQNDS PSIQTETDIH
PDFSQSIQFS SISIPGLLIE DSIIKEINQS FKDWSGIQDE NISEYAQILI SHTVQARENR
SLVFSSLYPA GLKSYQIQIQ PSISLPDKNI YWFIDQSEAQ ESIASLQNQI ESLHSELTSI
KNNLQEERSA MKTSEDISGQ IDIVEFELSG GRYAMDIGMV REVVEMLPIT PLPKTPPYII
GIINLRGEVT HVIDLAVLLG ERIKKDRSGQ KIIIVPPDAA HGEHLGIIVD NVRSVTEIGV
RQVTALGDEI NERIQTRIKG IIKVTHDDLI EKREGEEKEA NLVIWLDMKE ILNRMASLH