Gene Mhun_0606 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMhun_0606 
SymbolileS 
ID3924432 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanospirillum hungatei JF-1 
KingdomArchaea 
Replicon accessionNC_007796 
Strand
Start bp699453 
End bp702641 
Gene Length3189 bp 
Protein Length1062 aa 
Translation table11 
GC content49% 
IMG OID637896244 
Productisoleucyl-tRNA synthetase 
Protein accessionYP_502083 
Protein GI88601905 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0060] Isoleucyl-tRNA synthetase 
TIGRFAM ID[TIGR00392] isoleucyl-tRNA synthetase 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.63379 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0365182 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCAAGAGG TTACCAGCAG TTTTACGCCC AGGGTAATAG AAGCCTCGGT TCAGAAATTC 
TGGACACAGG AGGACATATA TGCCCGGGTA CAGGAGCAGA ACCGGGATGG CAAAACATGG
TTTTTCGTAG ATGGGCCGCC ATATACCACC GGGCACATTC ACCTTGGAAC AGCATGGAAT
AAGATCCTCA AAGACAGCAT TCTCCGGTAT AAGCGGATGC ATGGGTTACA TGTCATCGAT
CGTGCCGGAT ATGATATGCA CGGCCTTCCC ATCGAAGTCA GGGTCGAACA TGAACTTGGC
TTTGAAAATA AGAAAGATAT AGAGGCTTTC GGTATCGGCG CATTTATCGA GCGGTGCAAG
CAGTTCGCCC TCAGCCATAA AGACATCATG TCAGAGCAGT TTAAATCTCT CGGCGTCTGG
ATGAACTTTG ATGATCCCTA CCAGACCATC ATGCCCGAAT ATATTGAAGC GGCATGGTGG
ACACTGAAAC AGGCAGATGA GAAGGGTCTC TTAGATCGTG GTCACCGGGT AGTCAACTGG
TGTCCCCGGT GTGAGACCGC CATCGCCGAT TCTGAAGTGG AATACTGGGA TGAACAGGAT
CCGTCAATAT TTGTAAAGTT TCCGATCCAT GGTCTTATGA ATGAATATCT GGTCATTTGG
ACCACGACCC CATGGACCCT TCCGGCAAAT GTGGCCGTTG CTGTCGATAA AGATTTCATA
TATGCAAGAG TTGAGGCAAT AAAAGAGGGG AAAAAGGAGA TTCTCTGGAT AGCAAAGGAT
CTTGTCGAAC CGGTATTAAA ACGGGGGAAA TATCAGGATT ATTCAATCCT CTCAGAAAAG
ACCGGAGAGG AACTGGCAGG AACAACGTAT GATTCACCAC TTGCTGATCT CATCCCTCGA
CAGAAAGAGA TCGTGCATAC GGTGGTTACC GCTGGATTTG TTGAGATGGA CAATACCGGC
ATGGTCCATA TCGCCCCCGG ACATGGATGG GACGATTATC TCCTTGGTGT GGAGAAAGGC
CTTGATGTGT TCTGTCCTGT TGACGGAGCC GGATACTATA CCGATGAAGG CGGGATATAT
GCCGGTCAGT TTGTCCGTGA TGCAAATGAG AAGATCCTAT CAGATCTTGG TAGTCATTTG
CTTGGGAGGC AGAAGATAAC CCACCGGTAT GGTCATTGCT GGCGGTGTAA GACCCCTATC
ATCTACCGGG CTACTGAGCA GTGGTTCATC TCTGTTCCGA AGATGAAAGA GAAGATGCTC
TCTGAGATCA AGGCGACTTC ATGGTATCCG GACTGGGCCG GGAGTGCCCG TTTTTATGAT
TTTGTCTCTG ATGCACGTGA CTGGTGTATC TCACGACAGC GGTACTGGGG TATCCCGATT
CCGGTCTGGC AGTGTTCCTC ATGCTCTGCC CACCGGGTCT TTGGGACGGT TGCAGAATTG
AATGCAGCAG CCGGGAGCAA TCTCACTGAT CCGCACCGGC CGTATGTCGA TGAGATAACC
GTGCCCTGTT CCTGTGGCGG GACCATGAAA CGGGTAGAGG ATATCTTTGA TGTCTGGTTT
GACTCGGCAA TGGCATCCTG GGCAACCCTT GGTTTTCCCC GGAATGATGC CCTGTTCCAT
GAGATGTGGC CTGCTGACTT TATCACTGAA GGGCAGGACC AGACCAGAGG ATGGTTTTAC
TCACAGCTTG GTGCCTCTAC GATTGCCTTT AACCGGTCTC CCTATAAGAG CGTCCTGATG
CATGGGTTTG CTCTCGATGC TGATGGGCGG AAGATGAGCA AGAGTCTTGG AAATGTGGTC
ACTCCTGAAG AGGTGGTTCA GAAGTTCGGT GTTGATGTTC TCCGTCTCTA TATTCTCTCA
TCCAATGCAC CATGGGAAGA CCTGAAATTC AACTGGGACG GGGTTTCAAC CGTAAACCGG
ACGATGAATA TCCTGTGGAA TGTGTATCGG TTCCCGCTTC CCTATATGAT TCTTGACGGG
TTTTCCCCTG CCCAGACATC AGACGGGAAG TATGATGATG AGTACATCGT TCGTTCCTAC
CGGGAGATGC CGGAGATTGA CCGGTGGATC ATCTCACGGA TTAATACCAT TGCCAGATCG
GTTTCTGCAG ACATGGATGA GTACCAATTG CACCGTGTCA CCCGGCTTTT GATGAATTTC
ATCCTTGAAG ATCTCTCCCG GTGGTACGTC CAGATTGTCC GGCCTCGTAT GTGGCTTGAG
GAAGACTCAC CTGACAAAAA GTTTGCATAT GAGACGATTA CATACTGTCT TCGCACCCTA
TGCAGACTTC TTGCCCCGTT TACTCCTCAT ATCACCGAAG CAATGTATGA GAATCTCCGG
CTGCCTGAAG ATCCGGTATC AGTTCACATG TTGAAATGGC CAGCAGGAGA TATCAGGCTT
ATTGATGAGA ATCTTGAGCG TCGGATGGAT GTTGTCCGGA AATTTGATGA AGCAGTTGCA
AATGCACGGC AGGCAGGGAA GAGAAAACTT CGTTGGCCGG TGCAGAATGT CATTGTTGTG
ACGTCAAGTG AATCGGTCAT CGAAGCTTTC AGGTCAATGG AAGATCTGGC AAAGGATCGA
GCCAATACCC GAAATATTGA GGTTATCCAG GGAAGCTGGG AACGGATGCG ATTCAATGCA
GAACCGGTCA TGAAGAAGAT CGGACCATCA TTTGGGAAGA AAGGACCGGT TGTGAAGGGT
CTGATTGAGG CTGCAGACGG GTCAGCCCTC CGAAAGCAGC TTGAGGAGTC CGGGTCGGTT
ACACTGAGTG ATGGATCTGA GGAGTTTGTC CTGACCGCTG AACATATGAC CTTCAGTCAG
CATCTTCCGG AAGGGATCTT TGGTGCAGAG ATGACCGATG CGTCGGTCTA TGTTGATACG
ACGCTTACTG AGGATCTTGA AGCTGAAGGA TATAGTCGTG AGATCATCAG AAGGCTTCAG
GAGATGAGAA AACAGCTTGA TCTGAATGTT GAGGATAATA TCGTGATAGA TGCTGTTATA
GAGGATGTGC ATCTGCGGGA GCTGCTTTCG GCATCATGGC TGGATCTCAT AAAACAAGAG
GTTCGGGGTA AAACGCTGAA GATTCATGAC TCTGTCGGTG GCAGGGATGG ATCAGTATTG
TTCCAGCTTG ACCGGGATTG GGATATTGAA GGAGTGAATG TTACGCTAGG GATATCTCTG
GCCGGATGA
 
Protein sequence
MQEVTSSFTP RVIEASVQKF WTQEDIYARV QEQNRDGKTW FFVDGPPYTT GHIHLGTAWN 
KILKDSILRY KRMHGLHVID RAGYDMHGLP IEVRVEHELG FENKKDIEAF GIGAFIERCK
QFALSHKDIM SEQFKSLGVW MNFDDPYQTI MPEYIEAAWW TLKQADEKGL LDRGHRVVNW
CPRCETAIAD SEVEYWDEQD PSIFVKFPIH GLMNEYLVIW TTTPWTLPAN VAVAVDKDFI
YARVEAIKEG KKEILWIAKD LVEPVLKRGK YQDYSILSEK TGEELAGTTY DSPLADLIPR
QKEIVHTVVT AGFVEMDNTG MVHIAPGHGW DDYLLGVEKG LDVFCPVDGA GYYTDEGGIY
AGQFVRDANE KILSDLGSHL LGRQKITHRY GHCWRCKTPI IYRATEQWFI SVPKMKEKML
SEIKATSWYP DWAGSARFYD FVSDARDWCI SRQRYWGIPI PVWQCSSCSA HRVFGTVAEL
NAAAGSNLTD PHRPYVDEIT VPCSCGGTMK RVEDIFDVWF DSAMASWATL GFPRNDALFH
EMWPADFITE GQDQTRGWFY SQLGASTIAF NRSPYKSVLM HGFALDADGR KMSKSLGNVV
TPEEVVQKFG VDVLRLYILS SNAPWEDLKF NWDGVSTVNR TMNILWNVYR FPLPYMILDG
FSPAQTSDGK YDDEYIVRSY REMPEIDRWI ISRINTIARS VSADMDEYQL HRVTRLLMNF
ILEDLSRWYV QIVRPRMWLE EDSPDKKFAY ETITYCLRTL CRLLAPFTPH ITEAMYENLR
LPEDPVSVHM LKWPAGDIRL IDENLERRMD VVRKFDEAVA NARQAGKRKL RWPVQNVIVV
TSSESVIEAF RSMEDLAKDR ANTRNIEVIQ GSWERMRFNA EPVMKKIGPS FGKKGPVVKG
LIEAADGSAL RKQLEESGSV TLSDGSEEFV LTAEHMTFSQ HLPEGIFGAE MTDASVYVDT
TLTEDLEAEG YSREIIRRLQ EMRKQLDLNV EDNIVIDAVI EDVHLRELLS ASWLDLIKQE
VRGKTLKIHD SVGGRDGSVL FQLDRDWDIE GVNVTLGISL AG