| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mhun_0331 |
|---|
| Symbol | |
|---|
| ID | 3923698 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanospirillum hungatei JF-1 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_007796 |
|---|
| Strand | - |
|---|
| Start bp | 371278 |
|---|
| End bp | 373383 |
|---|
| Gene Length | 2106 bp |
|---|
| Protein Length | 701 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 637895977 |
|---|
| Product | methyl-accepting chemotaxis sensory transducer |
|---|
| Protein accession | YP_501820 |
|---|
| Protein GI | 88601642 |
|---|
| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0840] Methyl-accepting chemotaxis protein |
|---|
| TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.0634228 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTGGAAA ATGTGAAGAT TGGAAAGAAG TTGATTGGCG GATTTATCCT TACTATTATC
ATAATGCTCA TCATTGCAGG GACCGGTTTT ATTTTTATCA GTGATCTTGC AGCGAAGAGT
GAAGAGATGT ATAACGACCG GTTAATTCCG ATTCAGCAGA TTGGTGTCAT TAATGGTGCA
TTCACCCAAT TCAGAGGTGA TGTGTACAAG GGTATGCTGA TCCCGGAAGA ACGTACCGTC
AACCTTGATT CTGCAGCAAG TGTACTTGCG TCAGTGAATG ACCAAATAGC AATTATTGAC
AAATTAAATT TGAATGAAGA AGAGAGAAAA GTTTTTGAAA GTTTTAAAAC TGCTTTCCAG
GGATACAAAG TTGAGTCTGA GAAAACTATT GCTCTCATAA AAGAGAATAA AATACCTGAA
GCGATTAGTT CTCTGGCCGC AGGAACCCCT CTGGCAAATT ACCGAACTCA ATGTAATGAG
GCATTGAAAA CCCTGATGGA AACTAACCTG AAAGTAGCTG AACAGATTAA GAAAGATAAT
GATAATAACG CAAATGCAGC GAAAACGACG ATGATTATCG TCACCATCAT CGGCGCAATC
ATCGGTCTTG GTTTTGCCAT AGCCCTGACC CGGAGTATCA CCGGGCCCCT AAGTAAAACC
GTGGAGATGA TCGATGAGAT GGGACACGGG CACCTAGGTA TGCGGCTCAC CATGGACCGG
AAGGACGAGA TAGGAATCCT TGCTTCAACA ATGGATACTT TTGCAAACAA CCTGCAGCAT
GAGGTTATCG GGATTATGAA AAAGATTGCC GCAGGAGAAA AAGTAACCTC TGTTCCGATC
ATGGATGATC GTGATGAGAT TGGTCCTGCT CTCAAGGAGA CCGCAGAAAC GCTCAGTGAT
CTGATTGAAG AGACAAAAAC CCTGGCACAT GCTGCAGAAG AAGGGAACTT AAGCATTCGC
GGTGATGCAG ACAAATTTAA AGGAGGATAT CGTGAGATCA TCGCCGGAAT CAACAACACC
CTTGAAAACA TCATCGGCCC GGTCAATGAA GCCATGAATC TTGCCGGTGC ATATGCGTTC
GGAGACTTCA CTGCTAGTTT TAGTGATAAG GTTTCAGTAA AAGGAGATTT CATACCATTC
AAAGACTCTC TGAATAAGAT CGGTATTGAA ACTGGCAGGG CAATCGGGCA GGTAAAGAAG
GAAGTGGATT CACTCCTTGC CGGGATGGAA GAGACCAGTG CAAGTGTCGA GGAAGTGACC
GCCGGTGCAC AAAACCTTGC CCATAACGCA GGCGTTGTCA GCGATCTGTC AGAAAAGAGC
GGAGCAGGCG TTAATCAGGT TCTTCAGGCC ATGAATGATC TGTCAACCAC CGTATCTGCA
GTTGCAACCC AGGCAAATGA AGTGGCCAAT CTCACCCAGG AGACTGATGA CCTCTCAAGA
CAGGGAGCGG AACTTGTCGG AAGGACAGAT GCCGGAATGC AGAAGATATC AAGCTCCTTT
AATGAGACTG ATCATGTCAT CGGTGAGATC GGAAAGCAGA TGGAGGATAT TGGAACCATT
GTCAACGTTA TCAGCTCAAT TGCTGACCAG ACCAACCTCC TTGCCCTCAA TGCAGCGATT
GAGGCAGCTC GTGCAGGGGA TGCAGGACTT GGATTTGCCG TTGTTGCTGA TGAAGTAAAA
TCCCTGGCAC TAGAGTCACA ACAGTCTGCA GAAAAGATTG CAAACCTCAT TACCGACCTG
CAGAAAAAAT CACGTGCCGT TACCGAATCC ATGAAAAACT CACTGAAAGA TGTTGATGAA
GGAAATACCG CTGTACGGGA GACCCTGACC GTCTTTAACA AGATTGCAGA GGCGATTGCG
AATGTCTCGA TCAGAGTCGG AGAGGTTGCC GGTGCCAGTG AAGAACAGGC AGCATCGGTT
GAGCAGATAA GCGCCAGCGT TCATGAACTT GGAAATCTCA TAGAACAGGC GGCAAAAGAA
GCGGTTGATT CATCAGCAGC AACTGAAGAG GCTTCAGCAG CCCTTGATCA GATAACCAGA
GTCATCACCG ATGCAACTGC ATCAATAGAC CGCATTTCCC AATCTATGGG TAGATTTACC
ACCTGA
|
|---|
| Protein sequence | MLENVKIGKK LIGGFILTII IMLIIAGTGF IFISDLAAKS EEMYNDRLIP IQQIGVINGA
FTQFRGDVYK GMLIPEERTV NLDSAASVLA SVNDQIAIID KLNLNEEERK VFESFKTAFQ
GYKVESEKTI ALIKENKIPE AISSLAAGTP LANYRTQCNE ALKTLMETNL KVAEQIKKDN
DNNANAAKTT MIIVTIIGAI IGLGFAIALT RSITGPLSKT VEMIDEMGHG HLGMRLTMDR
KDEIGILAST MDTFANNLQH EVIGIMKKIA AGEKVTSVPI MDDRDEIGPA LKETAETLSD
LIEETKTLAH AAEEGNLSIR GDADKFKGGY REIIAGINNT LENIIGPVNE AMNLAGAYAF
GDFTASFSDK VSVKGDFIPF KDSLNKIGIE TGRAIGQVKK EVDSLLAGME ETSASVEEVT
AGAQNLAHNA GVVSDLSEKS GAGVNQVLQA MNDLSTTVSA VATQANEVAN LTQETDDLSR
QGAELVGRTD AGMQKISSSF NETDHVIGEI GKQMEDIGTI VNVISSIADQ TNLLALNAAI
EAARAGDAGL GFAVVADEVK SLALESQQSA EKIANLITDL QKKSRAVTES MKNSLKDVDE
GNTAVRETLT VFNKIAEAIA NVSIRVGEVA GASEEQAASV EQISASVHEL GNLIEQAAKE
AVDSSAATEE ASAALDQITR VITDATASID RISQSMGRFT T
|
|---|
| |