Gene Mhun_0329 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMhun_0329 
Symbol 
ID3923696 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanospirillum hungatei JF-1 
KingdomArchaea 
Replicon accessionNC_007796 
Strand
Start bp369716 
End bp370408 
Gene Length693 bp 
Protein Length230 aa 
Translation table11 
GC content47% 
IMG OID637895975 
ProductABC transporter related 
Protein accessionYP_501818 
Protein GI88601640 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0410] ABC-type branched-chain amino acid transport systems, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.287188 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.159726 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCTGAACA TACAAAACCT CACCGTCTCC TACTCCCATC TGCAGGTTCT CTGGGATGTC 
AGCCTGGAGG TCAAAAAAGG GGAGATAGTC ACCCTTATCG GTTCGAATGG ATCAGGGAAG
ACAACTCTGG TCTCTTCAGT CATGGGATTT GTTCCTGCAT CCAGTGGAAC AATTACCTTT
GCCGATACGC CTATCACCGG ACTTCCAACG TATGAGATTG TCCATCACCA TCTGAACCTG
GTCCCGGAAA CGAGGAAATT ATTCGGAAAG ATGACCGTAA GGGAGAACCT GATGCTGGGA
TCCTATATGA ATCATAAGGA CTTTGATATT GAGTACATCT ATTCCCTCTT TCCAATCCTA
CAGGAGAGAC AGGACCAGTA TGCCGGAACA CTCAGCGGTG GTGAGCAGCA GATGCTTGCA
ATCGGGCGAT GCCTGATGTC TGGTCCGGAG ATGATCATCC TTGACGAACC TTCACTTGGA
TTATCTCCGA AATATGTTCA TACTGTCCTT GATACCATCA ATGCACTCAA TAAAGAAGGG
CTTACCATCC TACTTGTGGA GCAGAATGTG AAACGGGCCC TTGAGATATC ACACCGTGCC
TATATCATTG AAAATGGAAG AATTGTCCTC TCCGGACCTG CAGACAAGAT GTTACATGAT
CCCCATGTAA AAGAAGCATA TCTTGGCATG TGA
 
Protein sequence
MLNIQNLTVS YSHLQVLWDV SLEVKKGEIV TLIGSNGSGK TTLVSSVMGF VPASSGTITF 
ADTPITGLPT YEIVHHHLNL VPETRKLFGK MTVRENLMLG SYMNHKDFDI EYIYSLFPIL
QERQDQYAGT LSGGEQQMLA IGRCLMSGPE MIILDEPSLG LSPKYVHTVL DTINALNKEG
LTILLVEQNV KRALEISHRA YIIENGRIVL SGPADKMLHD PHVKEAYLGM