Gene Mhun_0328 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMhun_0328 
Symbol 
ID3923695 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanospirillum hungatei JF-1 
KingdomArchaea 
Replicon accessionNC_007796 
Strand
Start bp368729 
End bp369706 
Gene Length978 bp 
Protein Length325 aa 
Translation table11 
GC content48% 
IMG OID637895974 
Productinner-membrane translocator 
Protein accessionYP_501817 
Protein GI88601639 
COG category[E] Amino acid transport and metabolism 
COG ID[COG4177] ABC-type branched-chain amino acid transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.286891 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.171553 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCCCTC AGTTTCTCCA GGAGAGAAGA TATCAGTTCG CGGTGCTGGC ATTCATCGTG 
GCTATTCTTC TTCCGGTCAT TGTGGGATCA AACCAGTACT ACCGGACAGT CCTTATCCTG
ATGCTGATTT TTATCATCTA TGCGTCGGCC TGGAATTTTC TTACTTTCTC AGGCCAGGGC
TCGCTCGGTC ATGCTGCCTT TTTTGGGCTG GGCGGATATT TTTCATCTCT CATCGCTATT
AACTCCGGTA TCCCGCTGAT TATCGCAGTT TTTGCAGGAG CATGTGTCAC AGCCGGAATT
GGTGTTCTTA TCGGAATGAC CTGTGTAAGA CTCCGGGAAT GGTTCCTTGC CATGGTGACA
TTCGGGTTTG CGGTCATCAT CCAGACCCTT ATTGTGATAA GTCAGCTGAG CCCCATCACC
GGCGGATGGG ATGGGTTTGC AGTTCCAAAG CTTATCCCTT CATCAATTCC GGGGTCACCA
AACCTTGAGT ACTATGGTAT CCTTGCAATC GCTGTCGGCT CCATTCTGGT CTTTCATCTG
CTGCTCAAAT CAAAGATTGG ACTTGCACTT GCAGCAATCC GTGAGAATGA GATGGAAGCG
AAGGCATCAG GGATAAACCC GGTCCCGTTC AAGCTCTTTG CGTTTGGGAT AAGTTCTTTT
ATCACGGCAA TAGCAGGGGC CCTTGAGGTA TGTCATTTCG GATACATCTC TCCTGAGATA
TTCGGGACTG ATATCTCTTT CTGGCCGATT ATCTATTCAA TAACCGGCGG GCTTGGAACA
CTTGCAGGGC CGATCATCGG AACTATTGTT ATCAGTCTTC TCTGGGAAGG ACTAAATGCT
CTCGGCTTTA CGTATGAGCG GTTTATTGTG ATTGGGATTC TGCTCATCCT GACGATCATA
TTCCTGCCAA AGGGTCTGGT CAGTCTTCCG GAACGATTAC AATATTTAAA AAGGATAAAA
ACGGGAGATG AAAAGTGA
 
Protein sequence
MIPQFLQERR YQFAVLAFIV AILLPVIVGS NQYYRTVLIL MLIFIIYASA WNFLTFSGQG 
SLGHAAFFGL GGYFSSLIAI NSGIPLIIAV FAGACVTAGI GVLIGMTCVR LREWFLAMVT
FGFAVIIQTL IVISQLSPIT GGWDGFAVPK LIPSSIPGSP NLEYYGILAI AVGSILVFHL
LLKSKIGLAL AAIRENEMEA KASGINPVPF KLFAFGISSF ITAIAGALEV CHFGYISPEI
FGTDISFWPI IYSITGGLGT LAGPIIGTIV ISLLWEGLNA LGFTYERFIV IGILLILTII
FLPKGLVSLP ERLQYLKRIK TGDEK