Gene Mhun_0314 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMhun_0314 
Symbol 
ID3925228 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanospirillum hungatei JF-1 
KingdomArchaea 
Replicon accessionNC_007796 
Strand
Start bp352530 
End bp355505 
Gene Length2976 bp 
Protein Length991 aa 
Translation table11 
GC content41% 
IMG OID637895960 
Producttype II secretion system protein E 
Protein accessionYP_501803 
Protein GI88601625 
COG category[U] Intracellular trafficking, secretion, and vesicular transport
[N] Cell motility 
COG ID[COG0630] Type IV secretory pathway, VirB11 components, and related ATPases involved in archaeal flagella biosynthesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.281088 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.2578 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTAGCCT CCCAGTATCA GATCCCAGGA ACTCAGGTAA TTATATCAAT AATTCAGACC 
GGTCCATTAT TCTATGAATA CCAGGTAAAG GAACCAGAAC TCATGGGAGA CGATTCTGAA
CGGATCAAAT TCCTGCGTTC ACATTTTTCC CGCTTATTTC AGGATAAAAA GAGAAATCAG
CAGTTTGTCC AAAACTTTTC TCATGAATTC GCCCTTGAAA CTTCAAAATT ATATCCATCA
TTATCCCTGG ATAAGATCAA ATTATTTGAG TATTATATAT TCAGAGATTC CAGGGGATTT
GGTCCGATTC AACCTCTCAT TGATGATCCT TTTATCAGTT CAATAGCGAT CAATGGAACG
GATGGCTTGG TACATGTAAC CCACGACACA TATGAGACCA TTTCCACCTC CCTTCATCTT
CGTGAGGATG AAATTCGAAT ACTTGTAAAA AAATTTTGTA ACAGATCGAT TCGCCCGTTT
GATTATGATA CTATCCCAGA CGTAGTCGAA CTCCGAACGG GTTTGAAAAT AATTTTTTCA
GGGCAGAAAA AGAATAAAAC CCCTTTGATT ATTACTATTG AAAAACCCTC TTCAGACACC
CGGAGTCTTG TTCCTGATAG GATCATTTCC TCATATCATC TCTATCATGA TATGATAGAA
GTCACAATCA TCGTATCACC TCCTGACCGG TTTTTTTACC AGATATCCAT CATTCCCCTG
AGTGATCATG AAAAAAGTGC AATACAGGCA TCAATAGAAT ATATAAAAAA GAAAAGCGGT
TTACAGACGT TTCATGAGGG TGCATTCAGG ATATCAGAAA ATGATTTTTC AGGATTTTTA
CATACGAATT ATCCGGATAT TCCGGACCGA AAACACCATC TTCTGTATAC AGCCCTGACT
TTCAGACAGG ATGTTGTAAA ATGGATTCGG GTTATTCTTG CTGACCCAAA CATTACTAGA
ATTCTCTGCA CCCACCCCGG AAAATCGGTT AAGGTATGGC ACAAAAAAAC CCTTGGAGAA
ACAGAAACCT CCGTCATCCC AAATAGATCA GATATTAACC GATTTGCAAC CTTTTTAATT
AAATCTTCAG GGAAAGATTA TGACCCGTCT CAAAATGAAA TCACCCTACA ATTTAAAATG
GGAGAGAGAG TTTTCCTTAC CAGAATCAGG GATGATAAAG GTCATTACTA CCAGATAGAA
ATAGAGAAAA ACGGGAATAA AAAACCATTA CCTGAAAAGA ATCAAAGGGT ATCTGTTCCG
AAGATCACTC ACACACTAGA ATCCGAACCA GATGAGCGTA TTGATGCTCT GATTTCAAAA
ATTTTCGAAC GTGACCTTAA AAAAGAATCA TCCGAATCTT TACCTTCACC TAATGAACCG
GTAAAATACT CTGAAGAGGA GCAGGGATTT TTCCGTCTCC TGAATCCTCT AAAAAAGGGT
TTGAAAGGGT TTTCCCTATC CGGTTATCAA AGAAAAGAAA AGCCCAGCCG GGACGAAGCC
CCGGTTCCTG ATGTTCTTCA GGTTCCATCG GTCATGAATA TTCCTGCCAG AGATGATGAT
ATTGCAGAGG AAGCATACTG GCTTTACCAG CCGCATGCAT ATGCAGTCAT CTTACAGGAC
AAAAACAAGG AGCGATTGTA CCGGGTTATT GAACCTGAAC TTACTCCCCG TGAGAGAATC
ATTCTTGAAG AGACACACGA AACACTCCGT GATGTACTGG TATATGACAA ACCGGTATCC
CGGGGAGATC TTTTCCTCGA ATATGGTGAA GTTGCAAAGA TTGTCAGGAC GTATGATCCG
AAAATTCACG ATGATCGGCT CTCAGTTATC TATTATTATC TCCGACGCAA TCTGAATGGG
TATGGGAAGA TTGATCCTCT GATGTATGAT GAGCTTCTTG AGGATATCTC ATGTAACGGC
CATGATCTTC CCGTGTATAT TCATCACAGG TATTACGGAA GTATCCCAAC ATCTATCAGA
TTTGAATCGG AAGAACTCAA TCGGTTCGTT CTAAAACTCT CACAAAAAGC AGATAAACAG
GTTTCACTTA CATCACCCCT CCTTGATGCA TCACTCCCGA ACGGGTCACG TGCCCAGATT
ACGTATTCTG ATGTCGTTTC AACAAAGGGT AGTTCTTTTA CAATTCGTAA GTTCAGATCC
GACCCGATGA CCCCAGCGAC TTTGCTTGCA TTCGGGACGT ATAGTAACGA ACTTCTGGCA
TTTATCTGGC TTGCTCTTGA AAATCGTCAG AGTCTTATTG TTGTCGGGGG AACTGCCAGT
GGTAAAACAT CAGCAATGAA TGCATTCTCA TTTTTTATTC CTCATAATTC AAAGATCGTC
TCTCTTGAAG ATACCAGGGA GATTCAAATC CCCCAGAAAA ACTGGCTCCC AGTTCAGACC
AGAGTGAGCA ATTCATTTAA TGATCGGGGA AGCGTGGACC TTTTCGACCT GCTGAAGGCA
TCTCTTCGTC AGCGGCCGGA ATACATCATT GTTGGAGAGG TGAGAGGGAG TGAAGCCCAG
ACCCTGTTCC AGGCGATGAA CTCAGGCCAT ACCACTCTAT CTACCCTTCA TGCGGGAAAT
ATCGAAGAGG CATTGAACCG TCTAACAAAC GAGCCAATAA ATGTCCCTCC GGCTATGTTT
GGTGCTCTAA ACCTTATGGT TATTCAGACA TTTCATTACC GTGCCGGCAG GATGATCCGG
CGATGTGATG CCATTCACGA GATTGTTCTT GGAGAAGGTG ACAAGGTTAA CTGGAATACC
CTGTATGAAT ATGATCCGAA AAAAGATTCA TTTAAAAAAG TATTTAAAAA ATCCAAAACT
TTACAGACGA TTCAGTACAT GCATAACTGG ACCGATGAAG AGATTCAGTT CCAGTTGAAT
CTTCGTGCAT CGTTCCTTTC CAAACTCCGC AATCAATATA GTACCGATCC TGAAATCCTC
ATTCAGATGA TCTCTGATCT GCGGAGGATG GCATGA
 
Protein sequence
MLASQYQIPG TQVIISIIQT GPLFYEYQVK EPELMGDDSE RIKFLRSHFS RLFQDKKRNQ 
QFVQNFSHEF ALETSKLYPS LSLDKIKLFE YYIFRDSRGF GPIQPLIDDP FISSIAINGT
DGLVHVTHDT YETISTSLHL REDEIRILVK KFCNRSIRPF DYDTIPDVVE LRTGLKIIFS
GQKKNKTPLI ITIEKPSSDT RSLVPDRIIS SYHLYHDMIE VTIIVSPPDR FFYQISIIPL
SDHEKSAIQA SIEYIKKKSG LQTFHEGAFR ISENDFSGFL HTNYPDIPDR KHHLLYTALT
FRQDVVKWIR VILADPNITR ILCTHPGKSV KVWHKKTLGE TETSVIPNRS DINRFATFLI
KSSGKDYDPS QNEITLQFKM GERVFLTRIR DDKGHYYQIE IEKNGNKKPL PEKNQRVSVP
KITHTLESEP DERIDALISK IFERDLKKES SESLPSPNEP VKYSEEEQGF FRLLNPLKKG
LKGFSLSGYQ RKEKPSRDEA PVPDVLQVPS VMNIPARDDD IAEEAYWLYQ PHAYAVILQD
KNKERLYRVI EPELTPRERI ILEETHETLR DVLVYDKPVS RGDLFLEYGE VAKIVRTYDP
KIHDDRLSVI YYYLRRNLNG YGKIDPLMYD ELLEDISCNG HDLPVYIHHR YYGSIPTSIR
FESEELNRFV LKLSQKADKQ VSLTSPLLDA SLPNGSRAQI TYSDVVSTKG SSFTIRKFRS
DPMTPATLLA FGTYSNELLA FIWLALENRQ SLIVVGGTAS GKTSAMNAFS FFIPHNSKIV
SLEDTREIQI PQKNWLPVQT RVSNSFNDRG SVDLFDLLKA SLRQRPEYII VGEVRGSEAQ
TLFQAMNSGH TTLSTLHAGN IEEALNRLTN EPINVPPAMF GALNLMVIQT FHYRAGRMIR
RCDAIHEIVL GEGDKVNWNT LYEYDPKKDS FKKVFKKSKT LQTIQYMHNW TDEEIQFQLN
LRASFLSKLR NQYSTDPEIL IQMISDLRRM A