| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mhun_0255 |
|---|
| Symbol | |
|---|
| ID | 3925144 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanospirillum hungatei JF-1 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_007796 |
|---|
| Strand | + |
|---|
| Start bp | 281111 |
|---|
| End bp | 282271 |
|---|
| Gene Length | 1161 bp |
|---|
| Protein Length | 386 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 637895903 |
|---|
| Product | aminotransferase, class V |
|---|
| Protein accession | YP_501746 |
|---|
| Protein GI | 88601568 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0520] Selenocysteine lyase |
|---|
| TIGRFAM ID | [TIGR01977] cysteine desulfurase family protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.409 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 6 |
|---|
| Fosmid unclonability p-value | 0.112068 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGAAACAAG AAAACCCCCT TATCTATCTG AATAACGCTG CAACCAGCTG GCCAAAACCG
CCGGAAGTTA TTCAGGCCGT TCAGGAATCA TTGGAATTAC CCTTCGGTGG GGGAGGAAGG
GGAACTGGCA GAGCACAGAG GGATTATCTG ACCGAAGGTC GGGAAACGGT AGCACAATTT
TTTGGTAAAG ATTCTCCGGA TACAATCGTC TTCTCGTTGA ATGCAACCGA TGCCTTAAAC
ACTCTCATTC ATGGGTTTGC TGCATCACAG ACCGAAAAAT TCCATGTGAT TACAACCGCC
CTTGAACATA ACTCTGTGCT CCGGCCTCTT CATTATCTGG AAAAAACAGG GATGATTTAT
CTGGATTATA TCCCTTTTTC CAATGCACAG GTAAATCCTG AGTCCATCAT TGAAGCGGTG
ACCGATAAAA CCCATCTGGT GGTAATGAAT CATGGAAGCA ATGTCCTTGG ATCGGTGCAG
GACATCCGTG CGGTTGGGGA GTATCTGCAT GATAAAGGAA TTTTCTTTAT TGTTGACGGA
TCACAAACCG CCGTACATAT TTCCCTGAAT CTCTCCTCTC TCGAACTAGA TGCCTTTGTG
TTTACCGGGC ATAAAGGTCT CTTTGGAATG CCCGGTATTG GCGGGTTCTG TATTCGAAAT
CCTGATCCGG TTCTTCCGGT TCGGATGGGG GGAACTGGTA CTAATTCCAA ATCCCTTGAT
CAACCGGGTG ATCTGCCGGA GCGGTATGAG ATTGGAACTC ACAACTATCC GGGAGTTGCA
TCGCTGATTG CAGGTATCTC CTTCCTCCAG ACAATCGGGA TGGATACCCT GCAAAGAAAA
GCAGATCGTC AGATTGAATA TTTCATGAAG GAACTCTCAT CCGAACCAGG GATTACCATC
TATAATCCTG AGCCTGATCT TCCGATTATT GCGTGTAACA TTGCCGGACT TGATAATGAT
GATGTGGGGT ATATTCTTGC CAGGAAAGAT AATATCGTTG TCAGAACCGG TCTTCATTGT
GCTCCACTGC TGCATAATGC AATAGATGAT GGAGCCGGAT GTGTACGAAT CAGTCCTTCA
TGGTTTACGA CTGATGAAGA ATGCCAGATA GCCGCTGATG CTATAAAGGA GATTGCCCAC
CATGCGGATT CTCAGATCTA A
|
|---|
| Protein sequence | MKQENPLIYL NNAATSWPKP PEVIQAVQES LELPFGGGGR GTGRAQRDYL TEGRETVAQF
FGKDSPDTIV FSLNATDALN TLIHGFAASQ TEKFHVITTA LEHNSVLRPL HYLEKTGMIY
LDYIPFSNAQ VNPESIIEAV TDKTHLVVMN HGSNVLGSVQ DIRAVGEYLH DKGIFFIVDG
SQTAVHISLN LSSLELDAFV FTGHKGLFGM PGIGGFCIRN PDPVLPVRMG GTGTNSKSLD
QPGDLPERYE IGTHNYPGVA SLIAGISFLQ TIGMDTLQRK ADRQIEYFMK ELSSEPGITI
YNPEPDLPII ACNIAGLDND DVGYILARKD NIVVRTGLHC APLLHNAIDD GAGCVRISPS
WFTTDEECQI AADAIKEIAH HADSQI
|
|---|
| |