| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mhun_0215 |
|---|
| Symbol | |
|---|
| ID | 3923871 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanospirillum hungatei JF-1 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_007796 |
|---|
| Strand | - |
|---|
| Start bp | 240303 |
|---|
| End bp | 241199 |
|---|
| Gene Length | 897 bp |
|---|
| Protein Length | 298 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 637895863 |
|---|
| Product | binding-protein-dependent transport systems inner membrane component |
|---|
| Protein accession | YP_501706 |
|---|
| Protein GI | 88601528 |
|---|
| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG1173] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.0103943 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGTGAAT GTACATTATC CACACAGGTC AGAAAAATCT CCATATCCAT TCAAAAGTCA
GACTGGCTCT ATAGGTTTAA GATGAGACGT GATCTGCAGG TAGCATGCGT ATTAATTGTC
ATCATCCTTA TAATGGGGTT TTTTGCTCCT GATATTGCCC CCCAAAACCC GAATATTACA
GATCTGGAGG GAAAAAATCA AGGCCCTTCT GCAGATCACA TTCTCGGTAC TGATTACCTG
GGAAGAGATC TCTTCTCACG TGTCATCTGT GGGTTACAAA CCTCACTTGA GATAGCACTC
GCTACAATTG TGATCTCATT TATTATTGGA GTTACTATTG GTAGTTTCTC CGGATACCAA
AGTGGGTGGA TTGATAATGT CATCGCCCGA ATAATTGACG TATTTTTAGC ATTTCCATCC
GTAATCCTCG CTCTGGCTCT GATGATGCTT CTGGGAAGCG GAGTCTTAAA CATGATAATT
ATGCTGTCCA TCGTTCAGTG GGCATCGTTT GCCAGACTAA CGCGTGGCCA GGTCCTCGCA
GAAAAAAATC AGGAATATGT ATTATCAGCC AAAGCTGCAG CCCTTCCCGG ATGGTGGACT
ATGACAAAGC ATATCCTTCC AAATTGTATC ATGCCCGTTA TCGTACTTGC AACGATTGAT
ATCGGTCATG CAATTCTCAC CATTGCAACC CTCTCATTCC TTGGTGTCGG GATTCCCCCG
GCTATTCCGG AGTGGGGCTC AATGATTAAT TCTGGGCTGC CATATATGCG TATTGCTCCT
CTGAATGTAA TAGTTCCCGG ACTTGCAATT ACGTGCGTTA CTCTTCTCTT TAATATCACG
GGCGAAGGAA TTCGTGATAT CACCGATCCA AAGACAGACA ATGAGGGATC TTTGTGA
|
|---|
| Protein sequence | MSECTLSTQV RKISISIQKS DWLYRFKMRR DLQVACVLIV IILIMGFFAP DIAPQNPNIT
DLEGKNQGPS ADHILGTDYL GRDLFSRVIC GLQTSLEIAL ATIVISFIIG VTIGSFSGYQ
SGWIDNVIAR IIDVFLAFPS VILALALMML LGSGVLNMII MLSIVQWASF ARLTRGQVLA
EKNQEYVLSA KAAALPGWWT MTKHILPNCI MPVIVLATID IGHAILTIAT LSFLGVGIPP
AIPEWGSMIN SGLPYMRIAP LNVIVPGLAI TCVTLLFNIT GEGIRDITDP KTDNEGSL
|
|---|
| |