| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mhun_0110 |
|---|
| Symbol | |
|---|
| ID | 3923805 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanospirillum hungatei JF-1 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_007796 |
|---|
| Strand | + |
|---|
| Start bp | 127727 |
|---|
| End bp | 130759 |
|---|
| Gene Length | 3033 bp |
|---|
| Protein Length | 1010 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 637895763 |
|---|
| Product | CheA signal transduction histidine kinases |
|---|
| Protein accession | YP_501607 |
|---|
| Protein GI | 88601429 |
|---|
| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0643] Chemotaxis protein histidine kinase and related kinases
[COG1776] Chemotaxis protein CheC, inhibitor of MCP methylation |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCTGATC TGGATGCATA CCGGAGTCTC TATGTTGCAG AATCGCGGGA AAACCTTGAG
GGTATTGTCA GCAATCTTCT AGTTCTGGAA AAGGGTACAG ATTCTCATGC GATAGATGAG
ATCTTCCGGT CTGCTCATTC ACTCAAGGGC ATGTCTGCAT CCATGGGATT TTCACACATG
GAAGAGATCT GTCATGCTCT TGAGGATGTC TTCTCACAGA TCAGGAGTGG CCGACTTGAG
GTAACCCAGT CACTGGTTGA TGATCTCCTC GGTGGTGCAG ATGATATCGA ACTGATGATT
GATGAGATCG AGGCTGGTGG TGATGGACAG CTGGATCATA AGGACCAGCG GGTAAAAAGT
CTGAAACGCT GGCTGTCAGC GGATGAAGAG AAGGAGGTGG TAAAACCTGC ACCAAAGACC
CCTGCACCTA TAGAACCTCC CTCATCTGAT ACAGCTGGTG ATATGTATGA AGGTCCTGCA
TATGATCAGG ATTACGGGTC AGGTTGTCTG ACATACACAA TAACGTTCTC ACTTGCTGAC
AATGTAGATA ACAAAAACCT TCGTGGGATG CTGATACTTC AGAATCTGGA AAGTATCGGC
GAGATTGTTA CCTGTTCTCC TGAACGGACT ATCGTTGAGG ATGATGAGAA TTTCACCGGG
AACGTCACCC TGGAATTTCG GACAAATGCC GGAAAGAGTG CAATAGAAAC CATTCTCGGT
GTATCGGATA TTAAAACCCG GACGATCTCT GAGCCTGCCA TACCCGCTGA AGTATCTGGT
GTTCCCCAGG CGAAAGATGA ACCTGCCATT CCTCTAACAA AGGGTCCTTC AGACACCGGT
TTCAGGTATG AAATCCACGT GGAGATTTCG TCTTCGGTTG ATTCACGTAA TCTTCGTTCA
ATGCTGCTCC TTCAGAACCT TGAGGGGCTC GGAACCATTT TACATCTCTC TCCAAAGCGT
GAGATCATCG AGGATAGCGA TACATACAAC GGGGTTATGG ATATTCTCCT CAGTACAGTC
GAGCCACAGG AGAAGATCCA TGCCCTGCTC AAGGGTTCAG ATATCAAAAA TTATTCTGTC
AGGGTAGAAG TACCCGAGAT TTCAAAAGAA CCCGGCGCTG CCTTGGAGGG TTCAGATAGT
ACCTCTTTTG CCGGAATCCG AGCATCATCA GCAGATAAGG CAGAGAAAAA ACGGGAAGTT
AAAAATATCC GGGTTGATAT TGACCGGCTT GACCATATGA TGAACCTGGT TGAGGATCTG
GTCATCAATC GTGGCCGCCT TGAGCAGATC GCCCAGCAAT ATAAGATTAA AGAACTCGAT
GAAACCCTCA ACATGGTCGG CAGATCGGTA TCTGATCTGC AGGTCATGAT GATGGACATC
CGGATGATTC CGCTGAATCA TATCTTTAAC CGGTTTCCAC GAACGGTCCG TGACATTGCT
GCCAAAGAAG GAAAAGAAGT TGACTTCGTG GTCGAGGGTG GTGACACGGA ACTTGACCGG
TCGGTTATGG ACGGTCTGAA TGATCCGCTT TTACATCTTA TCAGAAACGC TCTTGATCAC
GGCATTGAAC CACCGGATGT CAGGATAGCA AACGGGAAAA ACCCGAAAGG CAGGCTGACC
CTCTCCGCAT CCAGGGACAA GGATAATGTC ATTATTGTCA TTGAAGATGA CGGTGGCGGT
GTCAACGTTG AGAAGATTAA AAAGAAGGCT ATTGAACGGG GTCTTATCAC CGAAGAGATT
GCAGCATCAA TGAGTGATCA GGATGCATAT GATCTCCTCT TCCAGCCCGG GTTTTCAACG
GCAGATAAGA TCACTGATAT CAGCGGCCGG GGGGTAGGCC TCGATGTCGT GAAGACCACA
ATTGCCTCAT TACAGGGCAC AATAAAACTT GAGTCTGTTC CTGGTCAGGG GAGCAGATTT
GAGCTGGTCC TGCCTCCGAC GATGGCAATT GTGATGGTAA TGATGATCCG GATCAATGGG
AAGCGGTGTG CCATCCCGAT TACCAACGTT GCTGAGGTTG CAAGCCTTGC TGCATTCCCT
ATCCAGAACA TCGGCAATGG AGAAGGTCTG CTGATGCGGG ATGAGATCAT TGTTCTTTAC
CGGCTTGATG ATATGTTAGG CCGATCCAAG TCAGAAGAGG TCATCGTCGT TCTTCAGAAT
GGGAACCGGA AGGGTGCCAT CATCGCAGAT CTCATTGAAG GGCAGCAGGA GGTGGTTATA
AAACCACTTT CGAAGTTTGT CGGAGCATGT GAGGGTGTCA GTGGTGTTAC GATTCCAGGT
GACGGGGAAG TAGTGCCGGT TCTTGATGTG AAGGCAATTC TTCGGGAAGG AGGACAGAAA
TCCGGACGAA AATCAGGCGG AAGGAGGGTG AAAAAGATGA TAAAAAATGT GATAGCAGAC
GGAGATCTGG CTATTAGTGA ACAACAGGCC GATGAACTGA GGGAACTTGG AAATATTGGC
GCAGCTCATG CTGCAACAAC CCTGTCTACA ATTCTGAGTA CGATGATACA GATCCGGGTG
CCTGAGATCA TCCTGGTCAA TCTTGCGAAT CTGCGCAATT ATCTTGATGA TGTCATGGCC
GCCATGACGG TCTTTCAGAT ACAGGGCCAG ATCAAAGGTG AAGGGTATCT TATACTGCAC
ATTCCTGAGG ATTCGATCAT CAGGCTTACC AATATCATGA TTGGGACGAC TGAGCTGAAC
CGGGAGATTG ATGACATGGA CCGGAGTGCC ATCAATGAGA TCGGGAATAT TATGACCTCA
TCGTTCCTTG ATGCATGTGC CACTTTGCTG AATATCATCA TGATCCCCTC CCCTCCCTCT
ATGGTCATTG ATATGCCTCA TGCTGCGCTT GAATCCATTA TTGCTACCCA AGAGATTAAG
GAGAATGTTG ATGAAGTGGT GTTGTTCAGG ACTGAACTGA CCTGTGCAAC CCATGAGATT
AAAGCAAATA TAATCCTCCT TCCAAGCAGA TCCCTGCTTG CAGAAATTTT TGCCAGAATG
GAGAATGTCA TAGCGGTAGC AAAATCAGGC TGA
|
|---|
| Protein sequence | MSDLDAYRSL YVAESRENLE GIVSNLLVLE KGTDSHAIDE IFRSAHSLKG MSASMGFSHM
EEICHALEDV FSQIRSGRLE VTQSLVDDLL GGADDIELMI DEIEAGGDGQ LDHKDQRVKS
LKRWLSADEE KEVVKPAPKT PAPIEPPSSD TAGDMYEGPA YDQDYGSGCL TYTITFSLAD
NVDNKNLRGM LILQNLESIG EIVTCSPERT IVEDDENFTG NVTLEFRTNA GKSAIETILG
VSDIKTRTIS EPAIPAEVSG VPQAKDEPAI PLTKGPSDTG FRYEIHVEIS SSVDSRNLRS
MLLLQNLEGL GTILHLSPKR EIIEDSDTYN GVMDILLSTV EPQEKIHALL KGSDIKNYSV
RVEVPEISKE PGAALEGSDS TSFAGIRASS ADKAEKKREV KNIRVDIDRL DHMMNLVEDL
VINRGRLEQI AQQYKIKELD ETLNMVGRSV SDLQVMMMDI RMIPLNHIFN RFPRTVRDIA
AKEGKEVDFV VEGGDTELDR SVMDGLNDPL LHLIRNALDH GIEPPDVRIA NGKNPKGRLT
LSASRDKDNV IIVIEDDGGG VNVEKIKKKA IERGLITEEI AASMSDQDAY DLLFQPGFST
ADKITDISGR GVGLDVVKTT IASLQGTIKL ESVPGQGSRF ELVLPPTMAI VMVMMIRING
KRCAIPITNV AEVASLAAFP IQNIGNGEGL LMRDEIIVLY RLDDMLGRSK SEEVIVVLQN
GNRKGAIIAD LIEGQQEVVI KPLSKFVGAC EGVSGVTIPG DGEVVPVLDV KAILREGGQK
SGRKSGGRRV KKMIKNVIAD GDLAISEQQA DELRELGNIG AAHAATTLST ILSTMIQIRV
PEIILVNLAN LRNYLDDVMA AMTVFQIQGQ IKGEGYLILH IPEDSIIRLT NIMIGTTELN
REIDDMDRSA INEIGNIMTS SFLDACATLL NIIMIPSPPS MVIDMPHAAL ESIIATQEIK
ENVDEVVLFR TELTCATHEI KANIILLPSR SLLAEIFARM ENVIAVAKSG
|
|---|
| |