Gene Mhun_0087 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMhun_0087 
Symbol 
ID3922105 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanospirillum hungatei JF-1 
KingdomArchaea 
Replicon accessionNC_007796 
Strand
Start bp107924 
End bp108715 
Gene Length792 bp 
Protein Length263 aa 
Translation table11 
GC content48% 
IMG OID637895740 
ProductABC transporter related 
Protein accessionYP_501584 
Protein GI88601406 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1116] ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGCAGAG TGGAAATATC TCATATCAGT CGGGAATTTA TCAAGGAGGA TGGGGATCGG 
GTTGTTGCCC TTTCAGATAT TAATCTCTCC ATCGCCGATG ATGAATTTGT CTCATTTGTC
GGTCCCTCAG GGTGTGGGAA GACCACGCTG CTCCGGATTA TCGCCGGTCT TGATAAGGCC
AGTTCCGGAG AAGTCCGGGT TGATGGATCA CTCATCACCG GACCGGGTCA GAAAGTCGGG
ATGGTGTTTC AGGAGTACTC CCTGTTTCCC TGGCGAAGTG TTCTCTCCAA TGTTGCCTTC
GGACTTCAGA TGAGAGGGAT TCCAAAAGAG GAACGGCAAG AGATTGCACG AAAATACATC
TCACTCGTCG GCCTCTCTCA GTTTGAACAA AGTTTTCCGT ATGAGTTGTC CGGTGGAATG
AGACAACGGG TTGCAATAGC CCGGGCACTT GCCACAGATC CAGATCTTCT GCTCATGGAT
GAACCATTCG GCGCTCTTGA TGCCCAAACC AGGAATCATA TGCAGTGTGA ACTGCTGGAT
ATCTGGGAGA CAAAAAAGAA GACTATTTTA TTTGTTACAC ATAGTTGTGA TGAGGCCGTG
TTCCTCTCTG ACCGTGTGGT GGTTCTCTCT CCACGGCCTG GTGTTATCAG AGAGATTATC
AATATACCGA TATCACGGCC ACGTGACAGG ACAAACAAGG AGTTTATCGA TCTCAGGCGT
TGTCTTCTCG AGATGATCGA TGAAGAGGAA CGAGAGGAAG AAAGGATTAA GTGTAAATCC
GGCAATTTAT AA
 
Protein sequence
MGRVEISHIS REFIKEDGDR VVALSDINLS IADDEFVSFV GPSGCGKTTL LRIIAGLDKA 
SSGEVRVDGS LITGPGQKVG MVFQEYSLFP WRSVLSNVAF GLQMRGIPKE ERQEIARKYI
SLVGLSQFEQ SFPYELSGGM RQRVAIARAL ATDPDLLLMD EPFGALDAQT RNHMQCELLD
IWETKKKTIL FVTHSCDEAV FLSDRVVVLS PRPGVIREII NIPISRPRDR TNKEFIDLRR
CLLEMIDEEE REEERIKCKS GNL