Gene Mhun_0054 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMhun_0054 
Symbol 
ID3924868 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanospirillum hungatei JF-1 
KingdomArchaea 
Replicon accessionNC_007796 
Strand
Start bp75137 
End bp75424 
Gene Length288 bp 
Protein Length95 aa 
Translation table11 
GC content49% 
IMG OID637895706 
Product50S ribosomal protein L30e 
Protein accessionYP_501551 
Protein GI88601373 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1911] Ribosomal protein L30E 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0738724 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATTTCA ATACATCTCT GAGACGTGCA ATTAAGACTG GGAAGGTTAT CCTCGGTCAG 
AACGAGACAA AGGACAGCAT TGAGAAGGGA TCTGCAAAGC TTGTCGTCGT TGCGGCAAAC
TGCCCTGCAG AATTTTCCGG TTATCTCTCC GGTAAGGATG GAGTAAAGAC GTATACCTAT
GAAGGGTCAG GCGTCCAGCT TGGTCGTGCT TGTGGTAAGC CCTTTATTGT GAGCGCACTA
GCAATCGAAG AGTCCGGTGA CTCTGACATT CTTACCCTTT CCCGGTAA
 
Protein sequence
MDFNTSLRRA IKTGKVILGQ NETKDSIEKG SAKLVVVAAN CPAEFSGYLS GKDGVKTYTY 
EGSGVQLGRA CGKPFIVSAL AIEESGDSDI LTLSR