Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mhun_0032 |
Symbol | |
ID | 3923488 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanospirillum hungatei JF-1 |
Kingdom | Archaea |
Replicon accession | NC_007796 |
Strand | + |
Start bp | 49051 |
End bp | 49881 |
Gene Length | 831 bp |
Protein Length | 276 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 637895683 |
Product | extracellular solute-binding protein |
Protein accession | YP_501529 |
Protein GI | 88601351 |
COG category | [E] Amino acid transport and metabolism [T] Signal transduction mechanisms |
COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.427857 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATGAAAA GAAAAGGATT GGTGCTGGTC TCTCTTATTG GACTGGTTTT GTTATTGTTC ATGAGCGGCT GTACGACTAC TGAGCAGACT GCTCCATCAT CTGAAGTACA TGTTCAGCCA ACTGAAGAAG TATCGCAAGC AAAAGAATCT GTTCCCCTTT ACCGGGTAGG TATAGATGCT GCATATCAAC CATTTTCAAT GGTCGGACCT GATGGAAAAG CGACCGGATT TGATGTTGAT TCCATGAAAT GGATCGCAAA AGATCAGGGA TTTGAAGTTG AATTTTTACC CATTGCCTGG GACGGTATAA TTCCTGCTCT CCTTGCCGGA AAAATTGATC TCGTCTACGC AGGAATGACC ATTACTGAAG AGAGAAAAGA AAAAGTAAAC TTTTCAAAGC CATACTGGAC AGTCAACCAG ATGGTAGTTG TGAAAGAAGG ATCTCCGATA ACATTAGAAC AGGTAAAGAA CGGTTCTGTT GTCATCGGAA CGCAGCGTGG ATGTACTGCA GCAATATGGA TCGATGAAAA CCTGGTAAAT CAGAGTCTTA TGCCCGCACA AAATCTGAAA TTGTACGACA ACACCCCGCT CGCCGTTGAT GATCTGGTTT CAGGTCGTAT TGATGCGGTG ATGTATGACA GTACGGTCAT GAATGACATC ATTGCTGGAA AACCTGTTGC AAAGATTGGA ATGGTTGAGA CGAATGAGGA TTTCGGCATT GCTGTTCGGA AGGAAGATAC AGAACTGCTG GAAAAGCTCA ATTCAGGCCT TGAGAAACTC ATGGCTTCAC CTGATTGGGA AGCACTGAAA CAGAAATATA AAATGGAGTA A
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Protein sequence | MMKRKGLVLV SLIGLVLLLF MSGCTTTEQT APSSEVHVQP TEEVSQAKES VPLYRVGIDA AYQPFSMVGP DGKATGFDVD SMKWIAKDQG FEVEFLPIAW DGIIPALLAG KIDLVYAGMT ITEERKEKVN FSKPYWTVNQ MVVVKEGSPI TLEQVKNGSV VIGTQRGCTA AIWIDENLVN QSLMPAQNLK LYDNTPLAVD DLVSGRIDAV MYDSTVMNDI IAGKPVAKIG MVETNEDFGI AVRKEDTELL EKLNSGLEKL MASPDWEALK QKYKME
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