| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mhun_0031 |
|---|
| Symbol | |
|---|
| ID | 3923487 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanospirillum hungatei JF-1 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_007796 |
|---|
| Strand | - |
|---|
| Start bp | 48086 |
|---|
| End bp | 48904 |
|---|
| Gene Length | 819 bp |
|---|
| Protein Length | 272 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 637895682 |
|---|
| Product | extracellular solute-binding protein |
|---|
| Protein accession | YP_501528 |
|---|
| Protein GI | 88601350 |
|---|
| COG category | [E] Amino acid transport and metabolism
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.246666 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGACAAAA AGGTTGTATC TGTTCTTATC ACATTCTTTG TTCTTATTGG AGTTTGTCTG
TGCGGATGTA CGGAGAAACC GGCAGAGGAG AAAGGTGCGG TTGTCGCCCC GGAAGCCACA
GCAGCAGGTT CCGAGGAGAA GCCAACATAT ATCGTAGGTA TTGACGGGGA ATATCCACCG
TACAGTTTCA TTGACAAAAA TGGGGAACCC CAGGGATTTG ATGTTGAATC AGTCAAGTGG
ATTGCCGATG AAATGGGCTT TAATGTCAAG ATTCAGGCTA TGGCATGGGA CGGTATCATC
CCCGCTCTGC AGGCAGGAAA GATTGACATG GTCTACTCCG GAATGACCAT CACCGATGAA
CGGAAAGAAG TCGTCAATTT CAGCGACCCA TACTGGAAGG TAAACCAGTC AGTAGCAGTT
CACGATGACT CAGAGTTCAC CATGGATGAC TTCATGGCTG GTGCAGGAAA AGTCGGAGCA
CAGCGCGGGA CTACCGGTGC CTTCTGGGCT GAAGACAACC TGGTCAATAA GAGTATAATG
ACTGCAGATA TGCTCGTTAC TTATGATAAT TTCCCACTCG TTGCAACAGA CCTTCAGAAT
AAGCGGATTG ATTTCGCAAT ATATGACCGG CCACCAATGC TTGATGCTAT TGCAGGAAAA
CCGCTTCATA TCATCGGTGA AATTGATACC GGAGAAGAAT ATGGTATTGC TATCAGAAAG
ACTGATACTG AACTTCTTGA GACCATGAAT GAAGGACTTG TCCGGCTGAT GGCATCTCCA
AAATGGGATG AGCTTAAGAA GAAGTATGAG ATGGAATAA
|
|---|
| Protein sequence | MDKKVVSVLI TFFVLIGVCL CGCTEKPAEE KGAVVAPEAT AAGSEEKPTY IVGIDGEYPP
YSFIDKNGEP QGFDVESVKW IADEMGFNVK IQAMAWDGII PALQAGKIDM VYSGMTITDE
RKEVVNFSDP YWKVNQSVAV HDDSEFTMDD FMAGAGKVGA QRGTTGAFWA EDNLVNKSIM
TADMLVTYDN FPLVATDLQN KRIDFAIYDR PPMLDAIAGK PLHIIGEIDT GEEYGIAIRK
TDTELLETMN EGLVRLMASP KWDELKKKYE ME
|
|---|
| |